Gene Rpic12D_4133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4133 
Symbol 
ID8021821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp732681 
End bp733988 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content62% 
IMG OID644832914 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002984054 
Protein GI241665695 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG CAAGCCAGGC CCCGGCCATG GCGCTAACGG AGACGAAGAG CTCTGTGCGC 
TGGAAGATTT TCTTGATGAT GTTGATGCTG ATTTCCATCA ACTACGTCGA CCGCGCATCG
TTGTCAGTCG CGATGCCGCT GATCGCGAAG GAATTCAACA TCGGCCCCGC GGTGCAAGGC
TTACTGCTGA GTTCGTTCTT TCTGACGTAC GCGCTCATGC AGATCCCAGG CGGCATGCTG
GCCGACCGGT TCGGCCCGCG TGTGGTGATT GCCGGTGCCA CGCTGGGCTG GGGCTTCTTC
CAATCCATCG CGGCCCTGTG TACCGGTTGG GTGCCGCTGC TTGTCACGCG TCTTGGCCTG
GGTGCGGCTG AGGCACCCAT CTACCCCGCC GGGGGCAAGC TCAACGCCAT CTGGATGACA
CAGAACGAAC GCGGCCGCGG TGCCACGCTG CTCGACGGCG GTGCGCCGCT GGGTGCGGCA
CTGGGCGCGC TCATCATCGC CGGGCTGATC GCCGAGTTCA ATTCGTGGCG CACGTCGTTC
GTGGTGGCTG GTATCGGCAC GATGGTGGCA GGCCTCTTCG CGTGGTGGTA CATCCGCAAC
CACCCGCGCG AGCATCCGTC CGTCAATGAT GCTGAAGCTG CCTACATTGA AGAGGCACAC
GCAGCCGACC AGGCTGCCGA GCCCGCCGCC TTGAGCGGCA ACGTGCTGGA CTTCTTCAAG
TACCGCTCGG TGTGGGGCAT GTTCTTCGGC TGGATGTGCT TCAACGCACT GTTCTACGGG
TTGTTGACGT GGATGCCGAC ATACCTGTCG AAGGTGCACG GGCTCGACAT CAAGGAGATG
GGCGGTGCCG TCTTCACGAT GTTCTTCTCC GGTTTTGTGG GCGAGATGGT CGGTGGATGG
ATTGCCGACA AGTGGATGGC CACCGGGGCA TCGCGCGCCC GCGTGCTGCG CACCCTGTTC
GGCATCGCTT CGGTATTGGC CACGATCGCC ATCTACACGG TGGCGCGCTT CAAGGATCCG
GTTGTGGTGG TGGCACTGTT GTCGACCACG CTGTTCTTCC TGCGCTGGTG CGGTCTGTTC
TGGTGCATTC CGTCGATCCT GGGTACGCGC AAGCGTGTCG GTTTCCTGGG CGGCACGATG
AACCTGGGCG GCAACTTCGC AGGGGTCGGC ATGCCGATCA TCGTCGGCCT GATCGTGCAG
GCGACCGGTT CGTACGACAT GGCGCTGATG CTGTTTGCAG CCGCCGGTGC GGGTCTGTTC
ATCTGTTCGA CGCTGCTGAT CGACTACAGC AAGAAGCTGC CGGTCTAA
 
Protein sequence
METASQAPAM ALTETKSSVR WKIFLMMLML ISINYVDRAS LSVAMPLIAK EFNIGPAVQG 
LLLSSFFLTY ALMQIPGGML ADRFGPRVVI AGATLGWGFF QSIAALCTGW VPLLVTRLGL
GAAEAPIYPA GGKLNAIWMT QNERGRGATL LDGGAPLGAA LGALIIAGLI AEFNSWRTSF
VVAGIGTMVA GLFAWWYIRN HPREHPSVND AEAAYIEEAH AADQAAEPAA LSGNVLDFFK
YRSVWGMFFG WMCFNALFYG LLTWMPTYLS KVHGLDIKEM GGAVFTMFFS GFVGEMVGGW
IADKWMATGA SRARVLRTLF GIASVLATIA IYTVARFKDP VVVVALLSTT LFFLRWCGLF
WCIPSILGTR KRVGFLGGTM NLGGNFAGVG MPIIVGLIVQ ATGSYDMALM LFAAAGAGLF
ICSTLLIDYS KKLPV