| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4122 |
|---|
| Symbol | |
|---|
| ID | 8021810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 721120 |
|---|
| End bp | 722148 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644832903 |
|---|
| Product | putative periplasmic substrate-binding transmembrane protein |
|---|
| Protein accession | YP_002984043 |
|---|
| Protein GI | 241665684 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAC CCCGCCGCAA CATCCTCCGT TTCACCATGG CCGCCACGCT GGCCGCATCG
CTCCTGGCCG GCGCCGTCAG CACCGCGCAT GCTGAAGCCA GCGAAGTCCG CATCTCCCAC
GGCTACGGCA TCCTCTACCT GCCCATCATG GTGATGGCCA GTGAGCACCT GCTGGAGAAG
CAAGCCAAAG CCGCCGGCCT GGGCGACGTG AAGGTCAGCT ACCGCATCCT GGACGGCGGC
AACGTCATCA ACGACGCCAT GCTCTCGGGC GCGCTGGACA TCGCCTCGCT GGGCGTGCCG
GGCTTCCTCA CGCTGTGGGA CAAGACGCGC GGCAGCGCGA TAGAAGTGCG CGGGCTCTCG
TCGCTCAGCT CCTCGTCGAT GTACCTGATG ACGCGCAACC CGAACGTGAA GACGCTGGCG
GATTTCTCCG ACAAGGACCG CATCGCCGTG CCGGGCATCA AGACCTCGCT GCCAGCCGTG
GTGCTGCAAA TGGCCGCCGC CAAGACCTTC GGCGACAAGC AGTTCAACAA GCTCGATCCG
ATCACCGTGC CGCTGCCGCA CCCTGACGCC ACCGCCGTCA TGCTGGCCGG CGGCAGCCAG
ATCAACAGCC ACATGGCCTC GCCACCGTTC TCGTACACCG AGGCTGCTGC ACCCGGCCTG
CACCGCGTGT TCAACACGGT CGACGTGCTC GGCAACATCA CGCTGGACAT GACCTACACC
AGCAAGAAGT TCTACGAGGC CAACCCGAAG CTGTCGGCGG CGTTCGTGGC GGCGCTGGAT
GAGGCGAACG CGCTCATCGC CAAGGACAAG TCGAAGGCTG CGCAGATCTA CATCACTCAA
TCGAAGGTGA AGAGTTCGCC GGAAGAGGTG AAGAAGATCC TGGACGATCC GGACTCGCGC
TTCACGACCA CGCCGGTGGG CGTCGCACAC TATGCTGAGT TCATGCAGCG CGTGGGTACG
CTCAAGAACA AGCCGGCGTC GTGGAAGGAT CTGTTCTTTC CGACGGTGCA GAGCAGACAG
GGTTCGTAA
|
|---|
| Protein sequence | MQQPRRNILR FTMAATLAAS LLAGAVSTAH AEASEVRISH GYGILYLPIM VMASEHLLEK
QAKAAGLGDV KVSYRILDGG NVINDAMLSG ALDIASLGVP GFLTLWDKTR GSAIEVRGLS
SLSSSSMYLM TRNPNVKTLA DFSDKDRIAV PGIKTSLPAV VLQMAAAKTF GDKQFNKLDP
ITVPLPHPDA TAVMLAGGSQ INSHMASPPF SYTEAAAPGL HRVFNTVDVL GNITLDMTYT
SKKFYEANPK LSAAFVAALD EANALIAKDK SKAAQIYITQ SKVKSSPEEV KKILDDPDSR
FTTTPVGVAH YAEFMQRVGT LKNKPASWKD LFFPTVQSRQ GS
|
|---|
| |