Gene Rpic12D_4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4117 
Symbol 
ID8021805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp718562 
End bp718999 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content60% 
IMG OID644832898 
Producttransmembrane pair domain protein 
Protein accessionYP_002984038 
Protein GI241665679 
COG category[S] Function unknown 
COG ID[COG4125] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCA TACAGAAAAC GCCAGCTGAG CGCCTTGTGC ATGCGCTGAC GTTCGAGTTG 
GTTGCCATGC TGATTTGTGC GCCGTTGTTC AGCTGGCTGA TGGAACTGCC GTTGGCTGAG
ATGGGTGTGA TGACGCTCAT GTTTGCTGCG GTGGCGATGG TGTGGAACAT GGTGTTCAAC
GCCATCTTCG AGCGCGTGGA GCGTCGCTAC AGGCTCTCGC GTACCTTGGT GCTGCGGGTG
GTGCATGCCT GCCTGTTCGA GGGCGGGTTG GTCTTGATGC TGGTGCCGCT GGCCGCCTGG
TGGCTCGACG TGGGGCTGTG GGAAGCGTTC GTGCTCGACA TCGGCATCAT GCTGCTGTTC
CTGCCGTACA CCTTCTTCTT CAACCTCGCA TACGACCATC TGCGCGCACG TTGGATGTCG
CGTCGCGCGC TGGCCTGA
 
Protein sequence
MQVIQKTPAE RLVHALTFEL VAMLICAPLF SWLMELPLAE MGVMTLMFAA VAMVWNMVFN 
AIFERVERRY RLSRTLVLRV VHACLFEGGL VLMLVPLAAW WLDVGLWEAF VLDIGIMLLF
LPYTFFFNLA YDHLRARWMS RRALA