Gene Rpic12D_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4112 
Symbol 
ID8021800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp714523 
End bp715164 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID644832893 
ProductYheO domain protein 
Protein accessionYP_002984033 
Protein GI241665674 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.246313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCA CTGAAGAAAA CCGCCTTCTG CTGCGCGAAG GCCGAAAGAT CGTCGAGGCG 
CTGGGCAAGA CGCTGGCGCC GCTGGTGGAA GTCGTCCTGC ACGACCTGAC CGATCCCGAT
CATGCCGTCG TCGCCATCGC CAACAACCTG TCCGGCCGCC AGGTGGGCGA CGCCGTGACG
GAACTGGGAC TCGCGCGCCT GGCCGACCCC GACTTCCCGG AAGTCATCGA GAACTACGCC
AACCGGTTTC CCGACGGGCG CCCGGCCAAG AGCACATCGA TCGGGCTGAA GAACAGCCGC
GGCGATTACG TGGCGGCCAT CTGCCTGAAC ATGGATGTCT CCATGCTGCA TGCCGTGACC
ACCGGCCTCA CGCAACTGAT GCGCGTTGAT GCGGCTGCGC CGCCAGTGCC CGAGTCGCTT
GGCTCCCGTC GCGTGGAAGA CGTGCGCATC GCGCTCGAAC AGTTTGCTGC CGCCCGCAAC
ACCACACCCA TGGCCATGAC CCTCGACCAG CGCCGCGAGG CTATGCGCGA ACTGGCCGTC
AGTGGCCTGC TGAACTTGCG CCGCGCGCTG ACCGAAGTCG CCCAGACACT CGGCGTGGCG
CGCTCCACCG TCTACACCTA TCTTCCCGAG GATCTCGCAT GA
 
Protein sequence
MKPTEENRLL LREGRKIVEA LGKTLAPLVE VVLHDLTDPD HAVVAIANNL SGRQVGDAVT 
ELGLARLADP DFPEVIENYA NRFPDGRPAK STSIGLKNSR GDYVAAICLN MDVSMLHAVT
TGLTQLMRVD AAAPPVPESL GSRRVEDVRI ALEQFAAARN TTPMAMTLDQ RREAMRELAV
SGLLNLRRAL TEVAQTLGVA RSTVYTYLPE DLA