Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4106 |
Symbol | |
ID | 8021794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 705408 |
End bp | 708041 |
Gene Length | 2634 bp |
Protein Length | 877 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644832887 |
Product | protein of unknown function DUF470 |
Protein accession | YP_002984027 |
Protein GI | 241665668 |
COG category | [S] Function unknown |
COG ID | [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.628735 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACG CCGCGTCCAA CGACGCCAGT CCAACATCGC GCCGATCTTC GGCCCGCACC CCGCCTGCCG CGCCCGCCAC GCCCGTGCGA TCCGAATCGG GCCTAGGCCT GGCCGGCTGG ATCGTGGTCG GCATGGTGCT CGTGCTTGGC GCACTCGTGT TCGACAGCCT GTATGCGCTG CTGGACCACG TGCACTACGC CGATATGGTC GCCGCGCTGC AGGCTACGCC GCGCTCGCAC CTGCTGCTGG CCGTGCTGGC CACGGCGCTG AGCTACGTCG CCCTGACCGG CTACGACGCG TCCGGCCTGC GCTATGCCGG CGCGCACGTC GCCCCAGGCA CGGTGGCCAC CACCTCGTTC ATTGCTTATG CGCTGGGCAA CACCGTCGGT CTCGGTTCGC TGACGGCCGG GGCGGTGCGC ACGCGCTTGT ACACGGCGGC CGGGCTCGAT CCTGCCCGTG TGACAGAAGC GGTCGCCTTC GATGCGGGCG CGCTTGGCGT GTCCACCACG GCCTTTGGCG CGGTCGGGCT GCTGTGGGGC GCGCCGCACA TCGCTACCAT TACGCATTTG CCGGCGCCGT TGCTCGAAGT CGTGGCCCTG CTGGTGCTGG CCGGCGTCGT GGCGTTGCTC GTGCTGTGCA TGCGGCAGCG CCATGTGACG CTGTTTGGCC GGTGGGAGGT CCGCCCGCCG CCGCCGGGCT TGGCCGCGCG TCAGTTTGCG ATTTCAGCGG CCGACATGAT TGCCGCGGCG GCGGCGCTGT GGGTGCTGAT GCCGGCAGGC GCGGTCGACC TACCGACGTT TGTGGCGTTC TATGCGCTGG CGGTCACGCT GGGCGTCCTG AGCCAGAGCC CGGGCGGCCT GGGTGTGTTC GAGGCCGTCA TCCTTCTGGG CTGCAGCGGC CAGGCGCCGC CGGCCGAGGT GCTGGCCGCG CTGCTGTTCT ACCGCGCCAT CTATTTCCTG CTGCCACTGG TCGTGGCCGC TGCCATGCTT GGCGCCTTCG AGTTGCGCTC CGGCGCCGGG GCACCGTTCG GCCGCGCTGC GGTCAAGTTG TCGCCGGGGC TGTTGGCCGC GCTGACGATG GTGGCCGGCG TGATGCTGCT GGTCTCGGGC GTCACCCCTG CCAGCGACGA AGCGGAAGAC CTCCTGCGCA TGCACGTGCC GCTGTTCGTG GTGGAAGCCT CGCACATGAT CGGTAGCGTG GCGGGGCTCA TCATGCTGTT TGTCGCACGC GGGCTGCTGC ACCGGCTGGA TGCCGCGTGG TGGGCGGCGC TGGTGCTGTC GCTGCTGACC GGCGTGCTGG CGCTGCCCAA GGGCATTGCC GTGTCGGAGA TGGCGGTGCT GGTGACGCTG GCGGTGCTGC TCGTCATCTC GCGCCGGCAG TTCGATCGGC CGTCGTCGCT GTTCTCGCAG CGGCTGGAGG CGGGGTGGCT GCTCGCCATG GTGTGCGTGT TTGCGGCGTG CGTGTGGATT CTCTTCTTCG CCTACCGCGA GGTGGCCTAC GCCAACCAGC TCTGGTGGCA ATTCACATTT GACGGCGATG CGCCACGTTC CATCCGCGCG CTGATGGCCG TGGCCGTCAC CGGGCTCGGC TTCGGCATGT GGCAGCTCTT TCGCAAGGAG CCAGGCGTTA CGACCTTCCC GAGCGACGAA GAACTCGCCC GCGCGGCCGA GATCGTCCGC AAGCAGCCTG CCGCCGATGC CACGCTCGCG CTGATGGGCG ACAAGAGCCT GCTGTTCTCG CCGTCGGGCA ACGCGTTCAT CATGTACGCC AAGCAGGGGC GCTCGTGGGT GGCGCTGTCC GACCCCGTGG GCGCGCAGCA GGAGTGGCCC GAGCTGATCT GGCGCTTTAT CGAAATGGCC GACGCGCATG GCGGGCGCGC CGCGTTCTAC AAGACGCGGC CGCAGACGCT GCCGCTGTAT CTCGATGCCG GCCTGCGTGC CTACAAGCTG GGCGAAGAGG CGTATGTGTC GCTGCCCGAC TTCAGCCTCA AGGGCTCGCG CCGCGCCAAT CTGCGCCATG GCGTGACGCG CGGCGAGCGC GAAGGGCTGT CGTTCGAGAT CATCCCGACG GCAGACGTGC CGACCGTCCT GGACGAATTG CGGGCCATTT CCGATGAATG GCTGCGCAAT CAGAACGCGC GCGAGAAAGG CTTCTCGCTC GGCGCATTTG ACGACCGCTA CATCCGCAGC CAGCCCGTGG CCGTGGTGCG CCGCGAGGGC GTCATCGTGG CGTTTGCCAC GCTGATGTGC CCCGATGTGC TGCGCATCGA GGCGAGCGTG GACCTGATGC GCTATCGCAG CGACGTTCCG CCCGGCACGA TGGATTTCCT GTTTGGCAAG GTCATCCTGC ACTTCCAGGC GCAGGGGTAT CAGCGTTTCG GGCTGGGCAT GGCGCCGATG TCGGGCATGG TTGAGCATCA GCTTGCGCCG CGCTGGCACC GCTTCGGACG GATGATGTTC CGGCACGGTG CGCGCTTCTA CAATTTCAGA GGGCTGCGCA ATTTCAAGGA CAAATTCGAG CCGGTGTGGG AAGCCCGCTA CCTGCTCGCA CGTGGCGGTA TCGCGCCGCT GTTCACATTG ACGGACGTCG CTGCGCTGAT CGGCGGCGGC TTGAAGGGAG TGATCTCCAA ATGA
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Protein sequence | MPDAASNDAS PTSRRSSART PPAAPATPVR SESGLGLAGW IVVGMVLVLG ALVFDSLYAL LDHVHYADMV AALQATPRSH LLLAVLATAL SYVALTGYDA SGLRYAGAHV APGTVATTSF IAYALGNTVG LGSLTAGAVR TRLYTAAGLD PARVTEAVAF DAGALGVSTT AFGAVGLLWG APHIATITHL PAPLLEVVAL LVLAGVVALL VLCMRQRHVT LFGRWEVRPP PPGLAARQFA ISAADMIAAA AALWVLMPAG AVDLPTFVAF YALAVTLGVL SQSPGGLGVF EAVILLGCSG QAPPAEVLAA LLFYRAIYFL LPLVVAAAML GAFELRSGAG APFGRAAVKL SPGLLAALTM VAGVMLLVSG VTPASDEAED LLRMHVPLFV VEASHMIGSV AGLIMLFVAR GLLHRLDAAW WAALVLSLLT GVLALPKGIA VSEMAVLVTL AVLLVISRRQ FDRPSSLFSQ RLEAGWLLAM VCVFAACVWI LFFAYREVAY ANQLWWQFTF DGDAPRSIRA LMAVAVTGLG FGMWQLFRKE PGVTTFPSDE ELARAAEIVR KQPAADATLA LMGDKSLLFS PSGNAFIMYA KQGRSWVALS DPVGAQQEWP ELIWRFIEMA DAHGGRAAFY KTRPQTLPLY LDAGLRAYKL GEEAYVSLPD FSLKGSRRAN LRHGVTRGER EGLSFEIIPT ADVPTVLDEL RAISDEWLRN QNAREKGFSL GAFDDRYIRS QPVAVVRREG VIVAFATLMC PDVLRIEASV DLMRYRSDVP PGTMDFLFGK VILHFQAQGY QRFGLGMAPM SGMVEHQLAP RWHRFGRMMF RHGARFYNFR GLRNFKDKFE PVWEARYLLA RGGIAPLFTL TDVAALIGGG LKGVISK
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