Gene Rpic12D_4095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4095 
Symbol 
ID8021783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp692602 
End bp693312 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID644832876 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002984016 
Protein GI241665657 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.267726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.126686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAATG ACGGCGTTGC CGCAGTAGAA AAGGCGCTGG CCTTGCTGGA TTGCTTCAAG 
CCGGGGGCGG AAGCCTTGTC GCTCGCAGCC TTGGCGCAAG CCTCGGGCAT GCACAAGACC
ACGGTGTATC GGCTGATGAA CTCGCTGGAG CGCATGAGCT ATGTCATCCG CTCCGAGTCC
GGCGCGTACT CGCTCGGGCC ACGCCTGCTG TATCTCGGCA AGCTCTACGA GCAGTCGTTC
CACTTGTCTT CCGTGGTGGA ACCGGTGCTG CACGCGCTGG CGGCCGCCAC GCGAGAGAGC
GCATCGTACT ACGTCGTCGA TCACGGCCGG CGGCTGTGCC TGTTCCGCGC CGAGCCCTCG
GAAGGCCTGC GTGAGACGCG GCTGCCCGGC ACGTCGCTGC CGCTGGACGA CACGGCCATC
AGCCACGTGC TGCGTTACTG GGGGCTGGGT GAAGCGCTGT ATGACGAAAC ACCCAAGCTG
CCGCTGTTCA CCTCGGGCGC GCGGGACCAG CACACGGCGG CGTTTGCCAC GCCCATCTTC
GGTTCCGGCG ACAAGTTCAT GGCTGCGCTG ACGCTGTCGG GCGCAGCCTC CCGGCTGGAA
GCGGCACGCA CCTCTGGGGA TGTCGTCGCG AAGCAGTTGC AGGCGGCGTC CGACCTGTCG
CGCAAACTCG GCGCAAGTGC GGCGTTGTGC GAACGCTTCT ACGGTGTTTG A
 
Protein sequence
MGNDGVAAVE KALALLDCFK PGAEALSLAA LAQASGMHKT TVYRLMNSLE RMSYVIRSES 
GAYSLGPRLL YLGKLYEQSF HLSSVVEPVL HALAAATRES ASYYVVDHGR RLCLFRAEPS
EGLRETRLPG TSLPLDDTAI SHVLRYWGLG EALYDETPKL PLFTSGARDQ HTAAFATPIF
GSGDKFMAAL TLSGAASRLE AARTSGDVVA KQLQAASDLS RKLGASAALC ERFYGV