Gene Rpic12D_4090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4090 
Symbol 
ID8021778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp685213 
End bp686010 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content67% 
IMG OID644832871 
Productenoyl-CoA hydratase 
Protein accessionYP_002984011 
Protein GI241665652 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.157339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.241539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAC TGGAAACACT GCACCAGAAC ACCGTCGCGG TGCTGACGCT CAAGCGTCCG 
CCAGCCAACG CGTTCACGCC GGAAGGTCTG CTGCAACTGC AAGGCACCGT CGCACGATTG
AACGCCGATG CACGCGTGCG CGCCCTCGTC GTCACCGGCG ATGGTCCGAA GTTCTTCAGC
GCAGGCGCAG ACCTCAACAC CTTTGCCGAT GGCGACCGCG ATGTGGCGCG CGAGGCCGCT
GCACGTTTCG GTGCCGCGTT CGAGGCGCTG CAGAATGCGC GCCCGGTGGT GATCGCCGCC
ATCAACGGTT TTGCGATGGG CGGCGGCCTG GAGTGCGCGC TCGCATGCGA CATCCGCATC
GCCGAGGCAC ACGCCAAGCT GGCCGTGCCA GAAACGGCCG TCGGCCTGCT GTGCTGCGGT
TGCGGCACGC AGACACTGCC ATGGCTCGTG GGTGAAGGCT GGGCCAAGCG CATGATCCTG
ACCGGCGAGC GCGTCGATGC GCAGACCGCC CTGCGTATCG GACTGGTGGA AGAGGTCGTG
GAAACGGGGG CCGCGCGCGA AGCCGCCATC GCCATGGCGC TGCGTGTGAC AACGTTGAGC
CCGCAAGCCG TCACCTTCAG CAAGCAACTC ATCCATCAGG CGCGCAACGG CGTGCCGCGC
GGCGCGGCGC TGGCCGTCGA GCGTGAGCGC TTTGTCGATC TGTTTGACCA CCCGGATCAG
CGCGAAGGCG TGAACGCCTT TCTGGAGAAG CGTGCGCCGC GCTGGCATTC CACGCACGAA
TCGGAGACGC GGCAATGA
 
Protein sequence
MIELETLHQN TVAVLTLKRP PANAFTPEGL LQLQGTVARL NADARVRALV VTGDGPKFFS 
AGADLNTFAD GDRDVAREAA ARFGAAFEAL QNARPVVIAA INGFAMGGGL ECALACDIRI
AEAHAKLAVP ETAVGLLCCG CGTQTLPWLV GEGWAKRMIL TGERVDAQTA LRIGLVEEVV
ETGAAREAAI AMALRVTTLS PQAVTFSKQL IHQARNGVPR GAALAVERER FVDLFDHPDQ
REGVNAFLEK RAPRWHSTHE SETRQ