Gene Rpic12D_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4083 
Symbol 
ID8021771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp677426 
End bp678103 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID644832864 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_002984004 
Protein GI241665645 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.575581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAC AACAAAAGAA CAAGGCACAA ACCACGCCCC AGCCCCTCCA ACACCATTAC 
CCTATGATGA CGCCTCCCCC TAGTCCCCTC GCCATCATGC CCAATCCCAT CACGCCAGCC
CCGGTAGAAC TGGCGAAGTG CTACCGCCTC CTGAACCACG GCCCGACCAC GCTGGTCACC
TCCGCCCACA ACGGCGTGCG CAACGTCATG GCTGCCGCCT GGGCGATGCC GCTCGACTTT
GACCCACCCA AGGTGCTGGT CGTGGTCGAC AGCCGCACAC TCACACGTGA GTTGATCGAA
GGCTCGGGCG TGTTTGCACT CAACATTCCC ACCCGCGCGA TTGCCGAGAC CACGCTGACG
GTCGGCACAC TCTCGGGCCG CGATGTCGAC AAGTTCGATG CCCTGGGCCT CGTCACCATG
CCCGCCCGTA CGATCGACGT GCCGCTGGTG GCAGGTTGTG CAGGGTGGCT CGAATGCCGC
GTCATTCCGG AGCCGCACAA CGAGAAGCGC TACGACCTCT TCATCGCAGA AGTGACCGCC
GCCTGGGCCA ATCCTGCGCT GTTCAGCAAC GGTCGCTGGC ACTTTACGGA TGCTGGCAGC
AAGACCCTGC ACTACCTCGC GGGCGGTGCA TTCTTTGAGA CCGGCGAAGC GTTCACCGTC
GAGGTGAAAC AGCTATGA
 
Protein sequence
MDQQQKNKAQ TTPQPLQHHY PMMTPPPSPL AIMPNPITPA PVELAKCYRL LNHGPTTLVT 
SAHNGVRNVM AAAWAMPLDF DPPKVLVVVD SRTLTRELIE GSGVFALNIP TRAIAETTLT
VGTLSGRDVD KFDALGLVTM PARTIDVPLV AGCAGWLECR VIPEPHNEKR YDLFIAEVTA
AWANPALFSN GRWHFTDAGS KTLHYLAGGA FFETGEAFTV EVKQL