| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4080 |
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| Symbol | |
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| ID | 8021768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 668999 |
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| End bp | 671443 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644832861 |
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| Product | ABC transporter related |
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| Protein accession | YP_002984001 |
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| Protein GI | 241665642 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.256448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.875845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACTT GCGAGCAAAT TTTGCAGGCC GCAACAATTG CGACGCCGCA CTCTTGCCTC
GATTTATGTT CGTCCTTTTC CCGTTTTGGG CTGTTTTTTG GCCATTTGGA CGCGCTTTTT
GAATTCTTTG CGCCACTGAT GACCCAGTCC TCCCCATCGT CCGCCCCCAC CGTCGTCCGC
GCTCAGGAAC CCTGGCGTGT CGTGCTCGGC TCAAGCCTTG CTCCAGAAGA AACCGTCCTG
GCCGGGCTGC AGCTGGATTT GGACGCGAGA TTGCATTTTA CCCAAGGGTG GCTGGTTGTT
ACGAACCGTC GCCTGATCGG CCAAGCCGTG GGTGAAAAGG ATTTGCAAAG CTGGGACATC
GCCCCCGGCA TGACGCTGGC CCACAGCGAC CACGCCGGCG TCGGCACGCT GGAGTTGTCC
GACGGCCAGC GCCGGCTGGC AAGCTGGCGC TACACGCTGG GCCACAATAC CGACGCGCTG
CGGCTGGCCG ATGCTTTCGA CGCCCAGCGC AACGCCCTGA CCACCGGCGC CAAGGCCGCG
CAGCCCGACG CGGACATCTG CCCGACCTGC AAAGCGCCCC TCCCGGCCGG TGAAGACAAC
TGCCCGCAAT GCAGCCGTGA ACTGGAGCAG CCGCCCTCGA CCTGGGCGCT GCTGCGCCTG
TGGCGCTTCG CCCAGCCGTA TCGGTGGGAA TTGCTGGCCG GTTTCGCCCT GCTGCTGATC
GGCACGGCCG CCACCCTGGT GCCGCCGTAC CTGACGATGC CCTTGATGGA CAAGGTGCTG
ATCCCCTACC AGAACGGGCA GCCGGTCGAT TACCGCCTGG TGACGCTCTA TCTGTCCGGC
CTGTTTGGCG CCGCGCTGGT GGCCTGGGTG CTGGGCTGGG CGCGCACGTA TCTGCTGGCG
CGCGTGTCCG AGCGCATCAG CGCCGACCTG CGAACGACCA CCTACGAGCA CCTGCTCAAG
CTGTCGCTCG AATATTTCGG TGGCAAGCGC ACCGGCGACC TCATGGCGCG CATCGGTTCG
GAAAGCGACC GCATCAGCGT GTTCCTGTCG TTGCACCTGC TCGATTTCGC CACGGATGTG
CTGATGATCG CGATGACGGC CGTCATCCTG GTTTCGATCG ACCCATGGCT GGCGCTCGTG
ACACTCGTGC CGCTGCCATT CATCGCGTGG ATGATCCACC TGGTGCGCGA CCGCCTGCGC
CACGGCTTCG AGAAGATCGA CCGGATCTGG TCGGAAATCA CCAACGTGCT GGCCGATACG
ATCCCGGGCA TCCGCGTGGT CAAGGCCTTT GCGCAGGAAA AGCGCGAGGT GACGCGCTTT
GCCGAGGCCA ACAAGCACAA CCTGGCGATC AACGATCGCG TCAATGCGGT GTGGTCGCTG
TTTACCCCGA CCGTCACGCT GCTGACCGAA GTCGGGCTGC TGGTGGTGTG GATCTTCGGC
ATCTGGCGGG TGAGCCACGA CGCCATTACC GTCGGTGTGC TGGTGGCGTT CCTGACCTAT
ATCAGCCGCT TCTACACGCG CCTGGATTCC ATGAGCCGCA TCGTGTCCGT CACGCAGAAG
GCGGCGGCCG GCGCCAAGCG GATCTTCGAT ATTCTCGACC ACGTGTCGAG CGTGCCCGAG
CCGGCCAGGC CCGTGCATCT CGAGAAGGTG AAGGGCGCGA TCGAACTGCG CGACCTGGGC
TTCCGTTATG GCAACCGCGC GGTGATCCGC GGCCTGAACC TGTCGATCCA GCCGGGCGAG
ATGATCGGGC TGGTGGGGCA CAGCGGCTCG GGCAAGAGCA CGCTCGTGAA CCTGATCTGC
CGTTTCTACG ATGTGTCCGA AGGCGCGATC CGCCTGGATG GCACCGATAT CCGCTCGCTG
CCCGTGTCGG AATTCCGACG CAACATCGGC CTGGTGCTGC AGGAGCCGTT CCTGTTCTTC
GGCACGATCG CCGACAACAT TGCCTACGGC AAACCCGACG CCACGCGCGA AGAGATCATT
GCCGCCGCGC GTGCCGCCCA CGCCCACGAG TTCATCCTGC GCCTGCCGCA CGGCTACGAC
TCGCTGGTGG GTGAACGCGG CCAGGCCCTG TCGGGCGGCG AACGCCAGCG TATTTCGATT
GCGCGGGCCC TGCTCATCAA CCCGCGCATC CTGATCATGG ACGAGGCCAC GTCTTCCGTG
GACACGACCA CCGAGAAGGA AATCCAGAAG GCGCTCGACA ACCTCGTGCA GGGCCGCACG
ACCATTGCCA TCGCGCACCG TTTGTCGACG CTGCGCAAGG CGGATCGCCT GGTCGTCATG
GATCGCGGCC AGATCGTCGA AGTCGGCAAT CACGATGAGC TGCTCGCGCG CGAAGGGGCG
TACTACAAGC TCTATCAGGC GCAGGCCCGC AATGTCGATG CCGAAACCGA TCTGACCAGC
GACGGCGAGC GCGTGGACGC CGCGGCGCCG GCTTACGCGC AGTGA
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| Protein sequence | MYTCEQILQA ATIATPHSCL DLCSSFSRFG LFFGHLDALF EFFAPLMTQS SPSSAPTVVR
AQEPWRVVLG SSLAPEETVL AGLQLDLDAR LHFTQGWLVV TNRRLIGQAV GEKDLQSWDI
APGMTLAHSD HAGVGTLELS DGQRRLASWR YTLGHNTDAL RLADAFDAQR NALTTGAKAA
QPDADICPTC KAPLPAGEDN CPQCSRELEQ PPSTWALLRL WRFAQPYRWE LLAGFALLLI
GTAATLVPPY LTMPLMDKVL IPYQNGQPVD YRLVTLYLSG LFGAALVAWV LGWARTYLLA
RVSERISADL RTTTYEHLLK LSLEYFGGKR TGDLMARIGS ESDRISVFLS LHLLDFATDV
LMIAMTAVIL VSIDPWLALV TLVPLPFIAW MIHLVRDRLR HGFEKIDRIW SEITNVLADT
IPGIRVVKAF AQEKREVTRF AEANKHNLAI NDRVNAVWSL FTPTVTLLTE VGLLVVWIFG
IWRVSHDAIT VGVLVAFLTY ISRFYTRLDS MSRIVSVTQK AAAGAKRIFD ILDHVSSVPE
PARPVHLEKV KGAIELRDLG FRYGNRAVIR GLNLSIQPGE MIGLVGHSGS GKSTLVNLIC
RFYDVSEGAI RLDGTDIRSL PVSEFRRNIG LVLQEPFLFF GTIADNIAYG KPDATREEII
AAARAAHAHE FILRLPHGYD SLVGERGQAL SGGERQRISI ARALLINPRI LIMDEATSSV
DTTTEKEIQK ALDNLVQGRT TIAIAHRLST LRKADRLVVM DRGQIVEVGN HDELLAREGA
YYKLYQAQAR NVDAETDLTS DGERVDAAAP AYAQ
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