Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4072 |
Symbol | |
ID | 8021760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 661024 |
End bp | 661671 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644832853 |
Product | pyrrolidone-carboxylate peptidase |
Protein accession | YP_002983993 |
Protein GI | 241665634 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.63729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACCG TTCTTGTCAC CGGCATCGAG CCGTTTGAAT CCGACCCCAC CAACCCTTCG TGGGACATCG CGCAGGCACT CGACAGCACG CAGGTGGACA GCGCGGTCAT CGTGGCGCGG CAGTTGCCGT GCGTGTTTGG TCTCGCCAAC GAAATATTGG TGGACGCTAT CGAGGCCACA TCACCCGCCC TGGTGTTCGC GCTGGGGCTG GCCACGGGCC GGACGGAGAT TTCGGTGGAG CGCGTAGCCA TCAACGTGAT CGACGCACGC ATTCCCGACA ACGCGGGCAA CCAGCCGGTT GATACGCCTG TGGTGGCCGA TGGGCCAACG GCGTACTTCT CCACCCTGCC GATCAAAGCC ATCGTGCATG CGCTGCGCGA GGCCGGCGTG CCCGCGGGCG TGTCGCAGAG TGCAGGCACC TACAACTGCA ACCACCTGTT CTACGGTTTG ATGCACCACA TTGCCATGCG CGCGCCGCAG GTGCGCGGCG GCTTCATCCA CGTGCCGACC ACGCCCGAAC TGGCAGCGCG GCATGCGGGC CGGCCGAGCC TGTCGATCGA TACGCAGATC AAAGGAATAC GTCTGGCGGT GCGTACGACG CTGGCCACGC AGTCAGATCT GAAGATGAGC GCAGGTGCAG TGCATTGA
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Protein sequence | MTTVLVTGIE PFESDPTNPS WDIAQALDST QVDSAVIVAR QLPCVFGLAN EILVDAIEAT SPALVFALGL ATGRTEISVE RVAINVIDAR IPDNAGNQPV DTPVVADGPT AYFSTLPIKA IVHALREAGV PAGVSQSAGT YNCNHLFYGL MHHIAMRAPQ VRGGFIHVPT TPELAARHAG RPSLSIDTQI KGIRLAVRTT LATQSDLKMS AGAVH
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