Gene Rpic12D_4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4071 
Symbol 
ID8021759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp660332 
End bp660958 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content65% 
IMG OID644832852 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_002983992 
Protein GI241665633 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.184072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAC TGCTGCACGT GACCGTGAGC CCGCGCGACG ATCGCTCGCA CAGCCGGCGT 
GGCGCAAAGT GGGTGGTCGC ACAATTGGCA GAGGCCGTTG GTGGCCTGCG CGTCATCGAG
CGCGATCTGG CGGCCACGCC GTTGCCGCAT CCCGATGCCG GTTTTGTCGA GGCCAGCCTC
ACGCCCGATG CCGACCGCAC CGCAGCGCAC CGTGCAGCGC TTGCGCTGTC GGAAACGCTG
ATCGGCGAAC TGGGAGCAGC GGATGCCGTG TTGATTTCCA CGCCGGTGCA CAACTACACG
GTGCCTTCGG CGTTGAAGGC GTGGATCGAT CTGGTGGTGC GGCCCGAACG CACGTTCCGC
CGCACGCCCA CGGGCAAGGT GGGCATGCTG ACCGATCGCT CGGTGCTGGT GGTATCCGCT
TCAGGCGGCC ACTTTGACGG CGCCCACGCG CAGACCGATT TCCTGATGCC ATATCTGCGT
TATGTGTTTG CCACGGTGGG CATCCATCAG GTGGAAGGCA TCCGCTTGCA GAACACTGCG
CGCGGTGCTG ATTCCGCCAT GCAGGCCTTC GAAAGTTTCC GGCAGGAACT GGCTGCGCGG
ATGTTGCTCA TGCCGCTGGT GGCCTGA
 
Protein sequence
MTTLLHVTVS PRDDRSHSRR GAKWVVAQLA EAVGGLRVIE RDLAATPLPH PDAGFVEASL 
TPDADRTAAH RAALALSETL IGELGAADAV LISTPVHNYT VPSALKAWID LVVRPERTFR
RTPTGKVGML TDRSVLVVSA SGGHFDGAHA QTDFLMPYLR YVFATVGIHQ VEGIRLQNTA
RGADSAMQAF ESFRQELAAR MLLMPLVA