Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4071 |
Symbol | |
ID | 8021759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 660332 |
End bp | 660958 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832852 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_002983992 |
Protein GI | 241665633 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.184072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAC TGCTGCACGT GACCGTGAGC CCGCGCGACG ATCGCTCGCA CAGCCGGCGT GGCGCAAAGT GGGTGGTCGC ACAATTGGCA GAGGCCGTTG GTGGCCTGCG CGTCATCGAG CGCGATCTGG CGGCCACGCC GTTGCCGCAT CCCGATGCCG GTTTTGTCGA GGCCAGCCTC ACGCCCGATG CCGACCGCAC CGCAGCGCAC CGTGCAGCGC TTGCGCTGTC GGAAACGCTG ATCGGCGAAC TGGGAGCAGC GGATGCCGTG TTGATTTCCA CGCCGGTGCA CAACTACACG GTGCCTTCGG CGTTGAAGGC GTGGATCGAT CTGGTGGTGC GGCCCGAACG CACGTTCCGC CGCACGCCCA CGGGCAAGGT GGGCATGCTG ACCGATCGCT CGGTGCTGGT GGTATCCGCT TCAGGCGGCC ACTTTGACGG CGCCCACGCG CAGACCGATT TCCTGATGCC ATATCTGCGT TATGTGTTTG CCACGGTGGG CATCCATCAG GTGGAAGGCA TCCGCTTGCA GAACACTGCG CGCGGTGCTG ATTCCGCCAT GCAGGCCTTC GAAAGTTTCC GGCAGGAACT GGCTGCGCGG ATGTTGCTCA TGCCGCTGGT GGCCTGA
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Protein sequence | MTTLLHVTVS PRDDRSHSRR GAKWVVAQLA EAVGGLRVIE RDLAATPLPH PDAGFVEASL TPDADRTAAH RAALALSETL IGELGAADAV LISTPVHNYT VPSALKAWID LVVRPERTFR RTPTGKVGML TDRSVLVVSA SGGHFDGAHA QTDFLMPYLR YVFATVGIHQ VEGIRLQNTA RGADSAMQAF ESFRQELAAR MLLMPLVA
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