Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4055 |
Symbol | |
ID | 8021743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 643830 |
End bp | 645404 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832836 |
Product | alkyl hydroperoxide reductase, F subunit |
Protein accession | YP_002983976 |
Protein GI | 241665617 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGATG CTGATGTCAA GGCCCAACTG AAGGCCTACC TCGAACGCCT CGTGCAGCCC ATTGAGCTGG TCGCCAACGT CGATGACAGC GAGGGCTCCC GCGACATGAT GGACCTGCTG CGCGACGTGG CCGAGCAGTC CAGCATGATC GTGCTGACCG AACAACGCGA CGCTGCCGAG CGCGCACCGT CGTTCCTGAT CCGCCGCACC GGCGCGGATG TGAGCGTGCG TTTTGCCGCC ATCCCGACCG GCCACGAGTT CACCTCGCTC GTGCTGGCGC TGCTGCAAGT GGGCGGCTAT GCGCCCAAGC TCGAAGCCGA CGTCATCGAG CAGATTCGCA ATATCGAAGG GGATTTCCGC TTCGAGACCT ACATGTCGCT CACGTGCCAG AACTGCCCGG ACGTGGTCCA GGCGCTGAAC GTGATGTCCG TGATCAACCC GCGCATCCAG CACGTCGCCA TTGACGGCGC GCTGTATCAG GGCGAAATCG AAGCACGCCA GATCATGGCC GTGCCGACCG TGTTCCTGAA CGGCGAGACG TTCGGCACGG GCCGCATGGG CGTGGAAGAG ATCCTCGCCA AGATCGACAC CGGCGCCGCC GCGCGTGACG CTGAAAAGCT CGCCGCCAAG GAAGCGTTTG ATGTGCTGAT CGTTGGCGGT GGCCCGGCGG GTGCCGCGGC TGCGGTGTAC GCGGCACGCA AGGGCGTGCG CACCGGCGTG GTGGCCGAGC GTTTTGGCGG TCAGGTGCTC GACACGCTGG GCATCGAGAA CTTCATCTCC GTGCAGGAGA CCGAAGGGCC GAAGTTTGCC GCCGCGCTGG AGCAGCACGT GCGCCAGTAC GACGTTGACA TCATGAACAC GCAGCGCGCA GTCAAGCTCA CGCCGGCAGA CAAGCCGGGC GGCTTTGCCG AGGTGACGCT GGCCAACGGC GCGGTGCTCA AGGGCCGCTC GGTCATCCTG TCGACCGGTG CACGCTGGCG CAACGTCAAT GTGCCGGGCG AGCAGGAATA CAAGAACAAG GGCGTGGCGT ACTGCCCGCA CTGCGACGGC CCGCTGTTCA AGGGCAAGCG CGTGGCCGTC ATCGGCGGCG GCAACTCGGG CGTGGAAGCC GCCATCGACC TGGCCGGCCT GGTGAGCCAC GTCACGCTGC TGGAATTCGC CAGCGAGCTG AAGGCCGATG CCGTGCTGGT GCGCAAGCTG CAAAGCCTGC CGAACGCGAC CATCGTCACC AACGCGCAGA CCACCGAGAT CACCGGTGAC GGCCAGAAGG TCAATGGCCT GCGCTACAAG AGCCGCGTGG ATGGCGTCGA GCACACGGTC GCGCTCGAAG GCGTGTTCGT GCAGATCGGC CTGGTGCCCA ACACCGAATG GCTGGACGGC GCGCTTGAGC GCAATCGCTT TGGCGAGATC GTCGTCGACG CACGTGGCCA GACCAGCGCG GAAGGTGTGT TCGCTGCAGG CGATGCGACC ACGACGCCGT ACAAGCAGAT CATCATCGCC ACCGGCGATG GCGCGAAGGC CGCATTGTCG GCGTTCGATC ATCTGATCCG CGTGCCGCTG GCCGAAGCGG CCTGA
|
Protein sequence | MLDADVKAQL KAYLERLVQP IELVANVDDS EGSRDMMDLL RDVAEQSSMI VLTEQRDAAE RAPSFLIRRT GADVSVRFAA IPTGHEFTSL VLALLQVGGY APKLEADVIE QIRNIEGDFR FETYMSLTCQ NCPDVVQALN VMSVINPRIQ HVAIDGALYQ GEIEARQIMA VPTVFLNGET FGTGRMGVEE ILAKIDTGAA ARDAEKLAAK EAFDVLIVGG GPAGAAAAVY AARKGVRTGV VAERFGGQVL DTLGIENFIS VQETEGPKFA AALEQHVRQY DVDIMNTQRA VKLTPADKPG GFAEVTLANG AVLKGRSVIL STGARWRNVN VPGEQEYKNK GVAYCPHCDG PLFKGKRVAV IGGGNSGVEA AIDLAGLVSH VTLLEFASEL KADAVLVRKL QSLPNATIVT NAQTTEITGD GQKVNGLRYK SRVDGVEHTV ALEGVFVQIG LVPNTEWLDG ALERNRFGEI VVDARGQTSA EGVFAAGDAT TTPYKQIIIA TGDGAKAALS AFDHLIRVPL AEAA
|
| |