Gene Rpic12D_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4054 
Symbol 
ID8021742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp643141 
End bp643704 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content60% 
IMG OID644832835 
Productperoxiredoxin 
Protein accessionYP_002983975 
Protein GI241665616 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID[TIGR03137] peroxiredoxin 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGA TCAATACTCA AGTCCAACCG TTCAAGGCCC AAGCGTTCCA CAACGGCAAG 
TTCATCGAAG TCACGGATGA GTCGCTCAAG GGCAAGTGGT CCGTGCTGAT CTTCATGCCG
GCCGCATTCA CCTTCAACTG CCCGACCGAA GTGGAAGACG CAGCGGACAA CTACGCTGAA
TTCCAGAAGG CTGGCGCCGA GGTCTACATC GTCACGACCG ACACGCACTT CTCGCACAAG
GTGTGGCACG AAACGTCGCC GGCCGTGGGC AAGGCACAGT TCCCGCTGGT GGGTGACCCG
ACGCACGCGC TGACCAACGC CTTCGGCGTG CACATTCCGG AAGAAGGCCT GGCACTGCGT
GGCACGTTCG TGATCGACCC GCAAGGCGTG ATCAAGACGA TGGAAGTGCA CGACAACGCC
ATCGCCCGTG ATGTGAAGGA AACCCTGCGC AAGCTCAAGG CTGCCCAGTT CGTCGCCAAC
AACCCGGGCA ACGTGTGCCC GGCCAAGTGG AACGAAGGCG CCAAGACGAT CAAGCCGTCG
CTGGACCTGG TCGGCAAGAT CTAA
 
Protein sequence
MSLINTQVQP FKAQAFHNGK FIEVTDESLK GKWSVLIFMP AAFTFNCPTE VEDAADNYAE 
FQKAGAEVYI VTTDTHFSHK VWHETSPAVG KAQFPLVGDP THALTNAFGV HIPEEGLALR
GTFVIDPQGV IKTMEVHDNA IARDVKETLR KLKAAQFVAN NPGNVCPAKW NEGAKTIKPS
LDLVGKI