| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4047 |
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| Symbol | |
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| ID | 8021735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 624640 |
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| End bp | 626922 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644832828 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_002983968 |
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| Protein GI | 241665609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCA CGACCAACCT ATCCGGCACG CCGCGCACGC CGCTCCAGCA ACTGGCCACC
GATGCCGGGC TGCTGGTCGA CTGGGAAGAT GCTGCCAGCC GGCCCATGCG CGTGGCCGAC
GAGGTGCTGC GCGCCGTGCT CTTCACGCTC GGCCTGCCGG CCGGCACCCC GGCCCAGGTG
TCGGAAAGCC AGGCGCGCCT GCGCGCGGAA GCCGAAGCGG TGGCCATACC GCCGCTCGTG
ACCGGCGTGG TCGGGCAACC GATCGTGCTG CAGACGTCTG CGCCCCAAGC CGCGTTGCTG
GACGGACAAC CCTATCGTGT TGATTTCGAG TCCGACGGCA GCACCGAGGG CAGGATCAGC
GTCAGCGCAA GCGAGCACCA TGCAACGCTG CGCCTGGCAG CGGTACAGGC CGTTGGCTAC
CACCGCCTGA CCATCGACGC CGGGCCGGGC ACCGTGATCG AAGCCACGCT CGCCATTGCT
CCTGCGCGTT GCTATGGTGT GGCCGATGCG CTACGCCAGC ACGATCGCCC CACCGACTCA
CGCCTGTGGG GCGCCTCCGC ACAGCTCTAT GGCTTGCGAT GCGATGCGGA ACGCGCGGCC
AGCAGCGCAG GCCTGGGCGA CTACACCGCC GCGGGCACGC TGGCGCGGCA TCTCTCGCAG
CGCGGCGCGG ATGCGTTGGC ACTGAGCCCT GTGCACGCCA TGTTCACGGC CGACCCGCGT
CGGTATTCGC CGTACTCGCC ATCGAGCCGC CTGTTCCTGA ACGCGTGGAT GATCGACCCG
GCCGCGCTCT TTGGGAACGA AACCGTACGG CAAGCCGTGG TCGACTGCAA CCTCGTCGCG
GACTATGCCC GGCTGGAAGC CGCACCGCTC ATCGACTGGC CGGCCAGCGG CAACGCCCGC
ATGACGGTGC TGCGCGCGCT GCATCGGCGC CTGCTGCAAG CACCGCTCGG AGACACCATC
GGCCAGACGC TGCTGGACGA TTTTCGCGCG TACTGCATCA ATGGCGGCGC CAGCCTGCGC
GACCATGCGC ACTTTGAAGC GCTGAATGCG CACCTTGGGC CCGCGCATTG GAAGCAGTGG
CCCGCGCAGT ATCAAGATCC GAGCTACCTG GGCGTTCAGG CCTTCGCGCG TGAGCATGAA
GATGCGGTGA ACTTCCACCT CTTCCTGCAA TGGGCGGCGG CACGCCAGTG GGCCATCGCG
CAGCGCACCG CGGAGGGCGC CGGCATGGCC ATCGGCCTCG TCGCCGACCT GGCTGTTGGC
ACCGACAGCG CAGGCAGCCA CGCGTGGGCC CGGCAACGCG ACTTGCTGAT CGGCGTGACG
GTGGGTGCGC CGCCCGATGT GTTCAACGCA CAGGGCCAGG GCTGGGGCCT GACCACCTTC
AGCCCGCGTG CCATGCGCAC GCAAGGCTTT TCGGCCTTTA TCGAGATGCT GCGCGCGGTG
ATGGCCGTGC CCGGCGGTGT GCGCATCGAC CACGTGCTCG GGCTCATGCG GCTGTGGGTG
ATTCCCGATG GCGCGCGGCC GCTCGACGGC GTGTACCTGC GCTACCCGAT GCAGGATCTG
CTGCGGCTGG TGGCGCTGGA ATCGTGGCGC AACCGATGCA TCGTCATTGG CGAAGACCTG
GGCACCGTGC CTGCTGGCCT GCGCGACAAG CTCGCCGACG ACGGCCTGCT CGGCATGCGC
ATCCTCTGGT TCGAGCGCGA ATACACGCGC GACGATGCGC CCTTCAAGGC GCCGCGCACG
TGGGCGCCAG CCTCCGTCGC GATGACCAGC ACGCACGACC TGCCCACGCT CGTCGGCTGG
TGGATCGGCA ACGATCTGCG CTGGCAAGCC CAGCTCGGCC TGCTGCCGGC CGGCATGAGC
GAGAGCGAGG CGCACGCGCG CCGCATGGAC GATCGCGCCG CACTGGTTGC CGCCTTTGCA
GAGCACAACC GGCTGGTGCT GGCCGATGGC GGCGTGCCGA TGATCGGCGT GGCGTCGCTG
CAGGCGGCGC TGGAACAGAC GCGCGTGGCC ACCGCGGCGC AAGCTGAAGT CATCTTGCAA
GCCAGCGCGC AGGACTTTGC CACGGCAGCC ACCGTGTTTA CGGGCGCGGC CAATACGCCG
CTTGCGCTGG TGCCGCTGGA GGACTTGCTC GGCCTTGTCG AGCAGCCCAA CCTGCCGAGC
ACGATCGACA CACACCCGAA CTGGCGACGT CGTCTGCCAG GGCCGGCCGG CACGCTGATC
GAGGCACCCA CGGTGCTGGC GCGCCTGTCA GCGCTGGCCA ACGCGCGCAA CAGCATGTCA
TGA
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| Protein sequence | MDRTTNLSGT PRTPLQQLAT DAGLLVDWED AASRPMRVAD EVLRAVLFTL GLPAGTPAQV
SESQARLRAE AEAVAIPPLV TGVVGQPIVL QTSAPQAALL DGQPYRVDFE SDGSTEGRIS
VSASEHHATL RLAAVQAVGY HRLTIDAGPG TVIEATLAIA PARCYGVADA LRQHDRPTDS
RLWGASAQLY GLRCDAERAA SSAGLGDYTA AGTLARHLSQ RGADALALSP VHAMFTADPR
RYSPYSPSSR LFLNAWMIDP AALFGNETVR QAVVDCNLVA DYARLEAAPL IDWPASGNAR
MTVLRALHRR LLQAPLGDTI GQTLLDDFRA YCINGGASLR DHAHFEALNA HLGPAHWKQW
PAQYQDPSYL GVQAFAREHE DAVNFHLFLQ WAAARQWAIA QRTAEGAGMA IGLVADLAVG
TDSAGSHAWA RQRDLLIGVT VGAPPDVFNA QGQGWGLTTF SPRAMRTQGF SAFIEMLRAV
MAVPGGVRID HVLGLMRLWV IPDGARPLDG VYLRYPMQDL LRLVALESWR NRCIVIGEDL
GTVPAGLRDK LADDGLLGMR ILWFEREYTR DDAPFKAPRT WAPASVAMTS THDLPTLVGW
WIGNDLRWQA QLGLLPAGMS ESEAHARRMD DRAALVAAFA EHNRLVLADG GVPMIGVASL
QAALEQTRVA TAAQAEVILQ ASAQDFATAA TVFTGAANTP LALVPLEDLL GLVEQPNLPS
TIDTHPNWRR RLPGPAGTLI EAPTVLARLS ALANARNSMS
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