Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4037 |
Symbol | |
ID | 8021725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 611934 |
End bp | 612707 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644832819 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002983959 |
Protein GI | 241665600 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.743915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACGG AAGCCGTGCT CCTGCACCTG CGTTACCTGC TGATCGGACC GTATCCGAAT GGTCCGCTGG CCGGGGCGGC GCTCACGTTG TGGATGGCGC TGTGGGCCTG CGTGATGGCC ACGGCAGCGG GCGTCGGTTG TGCGCTGTTG CTGGACAGGC TCGACGCCAC GCCGGGCTTG CGCCGGTTGG CGCGCCTGCT ACGCGGGCTG CTGGCCACGC TGCGGGCTAT CCCGGTACTC ATGCTGATGT TCTGGGCGTA CTTTCTGATC CCCATGGCCC TGGGCGTGTC GGTGCCGGAA ACCGCCACGG TGGTCGCTGC ACTTGCCGCC GTGGGCGCGG CCTACATCAC CCAAAGCATG GAAGCCGGCT TGCGTGCCGT CGGTGCCGGG CAGCGCAATG CGGCACTGGC GCTGGGCATG TCGCCCCCAC AGGCGCTGCT GACCGTGGTG CTGCCGCAGG CGTGGCGCAT CATGCTGCCG TCACTCGCCA ACCAATGGGT ATCGACGGTC AAGGACACAT CGCTGGCGTA TATCGTGGGC GTGGTGGAAC TGTCCACCGC CGCCAGCCAG GTCAACAGCC GCACGGTGGC CTACCCGGCC GAGGTGTTCG GCGCGGTGGC CGTACTGTAT TTCCTGCTGT GCACCGGCAT CGAGGCCTTG CCCAATTGGT TGCGCGCAGG CCCCCGCACG CCTGCGGCGC AACCGGACCA CATGTCGACC TGGCAACGCT TTTTGCGCTG GCGCGAACGC CCTGTTTCAG ATGCCGTGAC TTGA
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Protein sequence | MTTEAVLLHL RYLLIGPYPN GPLAGAALTL WMALWACVMA TAAGVGCALL LDRLDATPGL RRLARLLRGL LATLRAIPVL MLMFWAYFLI PMALGVSVPE TATVVAALAA VGAAYITQSM EAGLRAVGAG QRNAALALGM SPPQALLTVV LPQAWRIMLP SLANQWVSTV KDTSLAYIVG VVELSTAASQ VNSRTVAYPA EVFGAVAVLY FLLCTGIEAL PNWLRAGPRT PAAQPDHMST WQRFLRWRER PVSDAVT
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