| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4025 |
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| Symbol | |
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| ID | 8021713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 599306 |
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| End bp | 600718 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644832807 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002983947 |
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| Protein GI | 241665588 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000146806 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAAAC CATCCACACG CCGCCTCGCC CTGTGCGCGC TGGCCGGCAC GCTGCTGCTG
TTGGGAGGCT GCGCCACCAT CACGCAAGAC AGCGGCTTCA AGACCGTTGC CGACGTGGCG
CGCGATCGGC TCGGCAAGGA CGCCACGTGG CATCGTTCAC CAGAAGCCCG CGACAGCGCC
GCGCAACGCA CGCGCGAGCT GCTCGCCCAG CCGCTGACGA TGGACAGCGC CGTGCAGATC
GCGCTGCTGA ACAACCGTGG CCTGCAGGCT TCGTATGCGG AGCTGGGGCT ATCCGAAGCC
GCGCTCGTGC AGGCCAGCCG TCTGCCGAAT CCCGGCTTCA GTTTCAAACG CACGCGCAGC
GGCGACGACC TGTCGATCGA GCGCACGTTT TCGCTATCTT TTCTGAACCT GCTGACGCTG
CCGATGGCCA CGCGCATCGA AGGCCGCTAC TTCGAACAAA CGAAGTTGCT GGTCGCCAAC
CAGATGCTGC AGGTGGCGAC CGACACACGC CGCGCGTACA TCAATGCCGT GGCGGCGGAG
CAATCGGCGC GCTATGCCGA GCAGGTTCAG CAAGCCGCAG AAGCCGGTGC CGAGTTCGCC
AAGCGTCTGG CTTCCGCAGG TAACTTCAGC AAGCTTGATC GTGCACGTGA ACACGCCTTC
TATGCGGAAG CCACTGCCAC CCTGGCGCGC ACGCGTCAGC AGGCGCAGGC CGAGCGCGAG
GCGTTGATCC GCCTGCTTGG TGTGTGGGGC ACGGATACCG GCTTCAAATT GCCCGAGCGG
CTGCCTGACC TGCCGAAGGA TCGCCCCGAG CTGCAGCAGA TCGAGGCCTA TGCGTTGCGC
AACCGGCTCG ATATCCAGGC GGGCAGGTTG CAGGTCGATG GCCTGGCATC GTCGCTGGGG
CTCACGCAGG CCACGCGCTT CATCAACGTG CTCGACCTCG GCTACGTGCG CAATAGCAAA
TCCAACGAAC CACGCGAAAC GGGTTACGAG ATCGGCATCG AGATCCCGCT GTTCGACTGG
GGCGGCGCCC GCGTGGCACG TGCGCAGTCG ATCTACATGC AGGCCGCCGA TCAGCTTGCC
GACACGGCCG TGCGTGCGCG TTCGGAAGTG CGCGAATCGT ACGTGCGCTA CCAGACCGCA
TATGACCTCA CGCGCCACTA CCGCGACGAG GTCGTGCCCG TGCGCAAGCG CATCTCCGAC
GAGATGCTGC TGCGCTACAA CGGCATGCTC GTGAGCGTGT TCGAACTGCT GGCCGATGCG
CGCGAGCAGG TGAATGCCGT GAACGGCTAC ATCGACGCGC TGCGCGGTTA CTGGATTGCA
CAGACCGACT TGCAGATGGC GCTGGGCGGC AGGCTGCCGC CCGCTGAAGC GAATGCGGCC
ACCACAGCGC CGAACCCTCC TCAAGGACAT TGA
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| Protein sequence | MLKPSTRRLA LCALAGTLLL LGGCATITQD SGFKTVADVA RDRLGKDATW HRSPEARDSA
AQRTRELLAQ PLTMDSAVQI ALLNNRGLQA SYAELGLSEA ALVQASRLPN PGFSFKRTRS
GDDLSIERTF SLSFLNLLTL PMATRIEGRY FEQTKLLVAN QMLQVATDTR RAYINAVAAE
QSARYAEQVQ QAAEAGAEFA KRLASAGNFS KLDRAREHAF YAEATATLAR TRQQAQAERE
ALIRLLGVWG TDTGFKLPER LPDLPKDRPE LQQIEAYALR NRLDIQAGRL QVDGLASSLG
LTQATRFINV LDLGYVRNSK SNEPRETGYE IGIEIPLFDW GGARVARAQS IYMQAADQLA
DTAVRARSEV RESYVRYQTA YDLTRHYRDE VVPVRKRISD EMLLRYNGML VSVFELLADA
REQVNAVNGY IDALRGYWIA QTDLQMALGG RLPPAEANAA TTAPNPPQGH
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