| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4003 |
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| Symbol | |
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| ID | 8021691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 583899 |
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| End bp | 584585 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644832788 |
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| Product | ThiJ/PfpI domain protein |
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| Protein accession | YP_002983928 |
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| Protein GI | 241665569 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.448495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTT CCCCATTCAT CGTTGTCTTT GCGCTGTACA ACCGTGTCAC CCAGCTCGAC
TTCACCGGTC CGCATGAGGT GTTCTGGCGG CTGCCCGGCG CGCAATGCGT GGTGGCTTCC
GCAGCCGGTG GTGAGATCCA TGCCGATGGC GGTCTCACCA TCTCGAACGT GCAGCGGTTG
GCGGACATTC CGCATGCTGA CCTGATTTGC GTGCCCGGCG GTTTCGGCGT GATCGAAGCC
ATGGAAGACG CAGAGTTCGT GCGCCAGGTG CGGCGCCTGG CCGACGGCGC GCGCTATGTC
ACGTCCGTCT GCAGCGGCTC GCTCGTGCTG GGCGCGGCGG GGTTGCTGCA GGGCAAGCGC
GCGGCCTGCC ACTGGGCATG GCGCAACCTG CTGCCCGCGT TTGGCGCCAC CGTGGACGAA
GCCCGCGTGG TGCGTGACGG CAACCTCATC ACGGGCGGCG GCGTGACGGC CGGCATCGAC
ATGGCGCTGA CGGTCATGGC CGACATTGCC GGCGCCGAAC ATGCGCAGGC CGTGCAGCTC
GGTATCGAAT ATGCCCCCGC GCCGCCGTTC GATTGCGGCC GCCCCGAGCG TGCGGCACCG
GAGATTCTCG AAGCGGTGAC GTCGCGGCTG GATCGTTTGC GTGCGGATCG CCATGACGCC
GTGCAGCGGG CGGCGCAGCG CCTCTGA
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| Protein sequence | MTTSPFIVVF ALYNRVTQLD FTGPHEVFWR LPGAQCVVAS AAGGEIHADG GLTISNVQRL
ADIPHADLIC VPGGFGVIEA MEDAEFVRQV RRLADGARYV TSVCSGSLVL GAAGLLQGKR
AACHWAWRNL LPAFGATVDE ARVVRDGNLI TGGGVTAGID MALTVMADIA GAEHAQAVQL
GIEYAPAPPF DCGRPERAAP EILEAVTSRL DRLRADRHDA VQRAAQRL
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