Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3999 |
Symbol | |
ID | 8021687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 581811 |
End bp | 582302 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832784 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_002983924 |
Protein GI | 241665565 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATGG TCAAACGTAC GAGCCACGCG GATTCTCTTT GCGGCGTCGC CAGGCCACTG GACGCCATTG GCGACGGGTG GTCGCTGCTG ATCGTTCGCG ATGCGTTTGA CGGCCTGCGC CGCTTTGGTG AGTTTCAGCG CAGTCTCGGA CTGTCGAAGA ACATCCTGGC GGTGCGCCTG CGCAACCTGG TTGCGCACGA CATTCTCGAG ACGGTGCCGG CGTCCGACGG CAGCGCGTAT CAGGACTACG TGCTGACCGA GAAAGGGCGC GCGCTGTTTC CGCTGCTGGT GGCGCTGCGG CAGTGGGGTG AAGCGTTCTG CTTTGCGCCG GATGAGGCGC ACGTTGTACT CGTCGACAAG GCAACGGGTA AGCCGGTGCC TCGCCTTGAA CTCCGTGCGC AGGACGGGCG CGCGCTGGCA CCGGAGGATA CGGTGGTCGT CCACCCATCG GCCATCAGGC CGACGAAGCG CCAGCGGGCG AAGGCGAGCT GA
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Protein sequence | MQMVKRTSHA DSLCGVARPL DAIGDGWSLL IVRDAFDGLR RFGEFQRSLG LSKNILAVRL RNLVAHDILE TVPASDGSAY QDYVLTEKGR ALFPLLVALR QWGEAFCFAP DEAHVVLVDK ATGKPVPRLE LRAQDGRALA PEDTVVVHPS AIRPTKRQRA KAS
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