Gene Rpic12D_3977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3977 
Symbol 
ID8021665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp559971 
End bp560666 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID644832765 
Productmetal dependent phosphohydrolase 
Protein accessionYP_002983905 
Protein GI241665546 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.750447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAC AAAGCCGCCC CCACATCATT CTCGCCAGCC TCACGCTTGC CGGCGGGTCG 
CGCTATCCGT CTGCCCTGGG CCATCTCGTC CGGACGGCCG CTGTTGCGGC GTATCTGGCA
AACGTTTTGG AGCTGGACGA CGCGGAACAG CGGCACATCT ATCTTGTGGC GCCCGTGCAC
GACATCGGCA AGCTTGGCAT TCCGGATGAC GTCCTGCTCA AGCCCGCCGC CCTGACCGAC
GCAGAGCACG AGATCATGCA ACGGCACTCC AACATCGGTG CCGACCTGCT TGCAGGGACG
GCCGACCCGA TCCTGCAGTT GGCAGCCAGC GTCGCGCGCC ATCATCACGA GCATTTCGAC
GGCAGCGGCT ATCCGGCCGG CCTCGCGGGG GAAGACGTCC CGCTTGCCGC GCGCATCGTG
GCCGTTGCCG ATGCGTTTGA CGCCATGCTG GAGCCGCGCG TTTACCGCGA AGGGATGTCG
GAGGATGACG CGGTCGGTGC GGTGGCAGAC CAGAGTGGCC GGTACTTTGA CCCCACGCTG
GTGGAATGCT TCCTGAAGAA CGTGCTGGGG GTTCGGCGCG CTCGTGCTGC TGCAGAAAGC
CTGGTGCAGC AGTACGGCGA CGTGTCGGGC GTCATCCGGT TCTATGGAGC TCGAGACCAA
TCGCCGGCAT TCCTGAGGTA TATCCAAACG CTTTGA
 
Protein sequence
MAQQSRPHII LASLTLAGGS RYPSALGHLV RTAAVAAYLA NVLELDDAEQ RHIYLVAPVH 
DIGKLGIPDD VLLKPAALTD AEHEIMQRHS NIGADLLAGT ADPILQLAAS VARHHHEHFD
GSGYPAGLAG EDVPLAARIV AVADAFDAML EPRVYREGMS EDDAVGAVAD QSGRYFDPTL
VECFLKNVLG VRRARAAAES LVQQYGDVSG VIRFYGARDQ SPAFLRYIQT L