Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3977 |
Symbol | |
ID | 8021665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 559971 |
End bp | 560666 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644832765 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_002983905 |
Protein GI | 241665546 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.750447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACAAC AAAGCCGCCC CCACATCATT CTCGCCAGCC TCACGCTTGC CGGCGGGTCG CGCTATCCGT CTGCCCTGGG CCATCTCGTC CGGACGGCCG CTGTTGCGGC GTATCTGGCA AACGTTTTGG AGCTGGACGA CGCGGAACAG CGGCACATCT ATCTTGTGGC GCCCGTGCAC GACATCGGCA AGCTTGGCAT TCCGGATGAC GTCCTGCTCA AGCCCGCCGC CCTGACCGAC GCAGAGCACG AGATCATGCA ACGGCACTCC AACATCGGTG CCGACCTGCT TGCAGGGACG GCCGACCCGA TCCTGCAGTT GGCAGCCAGC GTCGCGCGCC ATCATCACGA GCATTTCGAC GGCAGCGGCT ATCCGGCCGG CCTCGCGGGG GAAGACGTCC CGCTTGCCGC GCGCATCGTG GCCGTTGCCG ATGCGTTTGA CGCCATGCTG GAGCCGCGCG TTTACCGCGA AGGGATGTCG GAGGATGACG CGGTCGGTGC GGTGGCAGAC CAGAGTGGCC GGTACTTTGA CCCCACGCTG GTGGAATGCT TCCTGAAGAA CGTGCTGGGG GTTCGGCGCG CTCGTGCTGC TGCAGAAAGC CTGGTGCAGC AGTACGGCGA CGTGTCGGGC GTCATCCGGT TCTATGGAGC TCGAGACCAA TCGCCGGCAT TCCTGAGGTA TATCCAAACG CTTTGA
|
Protein sequence | MAQQSRPHII LASLTLAGGS RYPSALGHLV RTAAVAAYLA NVLELDDAEQ RHIYLVAPVH DIGKLGIPDD VLLKPAALTD AEHEIMQRHS NIGADLLAGT ADPILQLAAS VARHHHEHFD GSGYPAGLAG EDVPLAARIV AVADAFDAML EPRVYREGMS EDDAVGAVAD QSGRYFDPTL VECFLKNVLG VRRARAAAES LVQQYGDVSG VIRFYGARDQ SPAFLRYIQT L
|
| |