| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3975 |
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| Symbol | prpB |
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| ID | 8021663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 556821 |
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| End bp | 557717 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644832763 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_002983903 |
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| Protein GI | 241665544 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.583072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA CCCATCGACA CCCCACCAGC GCCGGCGCCA AGTTCCGTGC TGCCGTGGCC
GAATCCCAAC CGCTGCAAGT GGTGGGCGCC ATTACCGCCT ACGCTGCCAA GATGGCCGAG
CAGACCGGCT TCAAGGCCGT GTACCTGTCG GGCGGCGGCG TGGCGGCCAA CTCGCTGGGC
ATTCCGGACC TGGGCATCAG CACGATGGAA GACGTACTGA TCGACGCCCG CCGCATCACC
GACGCGGTGC AGATCCCGCT GATGGTCGAC ATCGACACCG GCTGGGGCGG CGCCTTCAAC
ATTGCGCGCA CCATTCGCTC GTTCATCAAG GCGGGTGTGG CCGCCGTGCA CCTGGAAGAC
CAGGTTGGCC AGAAACGCTG CGGTCATCGC CCCGGCAAGG AAGTCGTTTC CACCGACGAA
ATGGTCGACC GCGTGAAGGC CGCCGTGGAT GCCCGCACCG ATGACGATTT CGTCATCATG
GCCCGCACCG ATGCCGCCGC CTCCGAAGGC ATCGACGCCG CCATCGAGCG CGCCGTCGCC
TACGTGGAAG CGGGCGCCGA CATGATCTTT CCGGAAGCCA TGAAGACGCT GGACGACTAC
CGCCGCTTCA AGGCCGCTGT AAAAGTGCCC ATCCTGGCCA ACCTGACCGA GTTCGGCAGC
ACGCCGCTCT TTACCACCGA CGAACTGCGC AGCGCCAACG TGGACATTGC GCTGTACTGC
TGCGGCGCCT ACCGCGCAAT GAACGCTGCG GCGCTCAACT TCTATCAGAC CGTGATGCGT
GACGGCACCC AGAAGGCGGC CGTGGAAACC ATGCAGTCGC GCGCCGATCT GTACCAATAT
CTCGGCTACC ACGCGTACGA AGACAAGCTC GACGCGCTGT TTGCCGCCAA GAAATAA
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| Protein sequence | MSTTHRHPTS AGAKFRAAVA ESQPLQVVGA ITAYAAKMAE QTGFKAVYLS GGGVAANSLG
IPDLGISTME DVLIDARRIT DAVQIPLMVD IDTGWGGAFN IARTIRSFIK AGVAAVHLED
QVGQKRCGHR PGKEVVSTDE MVDRVKAAVD ARTDDDFVIM ARTDAAASEG IDAAIERAVA
YVEAGADMIF PEAMKTLDDY RRFKAAVKVP ILANLTEFGS TPLFTTDELR SANVDIALYC
CGAYRAMNAA ALNFYQTVMR DGTQKAAVET MQSRADLYQY LGYHAYEDKL DALFAAKK
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