| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3973 |
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| Symbol | |
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| ID | 8021661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 552702 |
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| End bp | 555299 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644832761 |
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| Product | aconitate hydratase |
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| Protein accession | YP_002983901 |
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| Protein GI | 241665542 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0926907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCA CCCACAGAAA GCCCCTCCCC GGCACAAAGC TCGACTACTT CGACGCTCGC
GAAGCTGTAG AAGCCATCAA ACAAGGCGCC TACGACAAGC TGCCCTACAC GTCACGCGTG
CTGGCCGAAA ACCTGGTCCG CCGCTGCGAC CCCGCCACCC TCACCGACTC GCTCAAGCAA
CTCATCGAGC GCAAGCGCGA TCTGGATTTC CCGTGGTTTC CGGCGCGCGT GGTCTGCCAC
GACATCCTGG GCCAGACCGC GCTGGTGGAT CTGGCCGGCC TGCGCGACGC CATTGCCGAC
CAGGGCGGCG ACCCCGCCAA GGTCAACCCG GTGGTGCCGG TGCAGTTGAT CGTCGACCAC
TCGCTGGCCG TGGAGTGCGG CGGCTTCGAC CCCGATGCCT TCGCCAAGAA CCGCGCCATT
GAGGACCGCC GTAACGAAGA CCGCTTCCAC TTCATCGACT GGACCAAGCT CGCGTTCAAG
AACGTCGATG TGATCCCGGC GGGCAACGGC ATCATGCACC AGATCAATCT GGAGAAGATG
TCGCCCGTCA TCCAGGCGCA TGACGGCGTG GCTTACCCCG ACACCTGCGT CGGCACCGAC
AGCCACACGC CGCACGTGGA TGCGCTCGGC GTGATCGCCA TCGGCGTGGG CGGCCTGGAA
GCCGAAAACG TGATGCTCGG CCGTGCATCA TGGATGCGCC TGCCGGACAT CGTTGGCGTG
GAACTGACCG GCCAGCGCCA ACCCGGCATC ACCGCCACCG ATATCGTGCT GGCGCTGACC
GAATTCCTGC GCAAGCAGAA GGTGGTGGGC GCCTACCTCG AGTTCTACGG CGAAGGTGCA
TCCAAGCTGA CGCTGGGCGA CCGCGCCACC ATCTCCAACA TGGCCCCCGA GTACGGCGCC
ACCGCGGCGA TGTTCTCGAT TGACGACAAC ACGCTCGACT ACCTGCGCCT GACCGGCCGC
ACCGACGAGC AGGTCAAGCT GGTCGAGACG TATGCCAAGA CCGCGGGCCT GTGGTCCGAC
ACGCTCAAGC ACGCTGAATA CGAACGCGTG CTGCGCTTCG ATCTGTCGAG CGTGGTGCGC
AACATGGCCG GCCCATCCAA CCCGCACGCG CGTGTGGCAA CGACCGACCT GGCCGCCAAG
GGCATCGCCG GCAAGTGGGA AGAAACGCCG GGCCAGATGC CGGACGGCGC GGTCATCATC
GCGGCCATCA CGAGCTGCAC GAACACCAGC AACCCGCGCA ACGTGATTGC CGCCGCGCTG
CTGGCCCGCA ACGCCAACCG CCTGGGGCTG ACGCGCAAGC CGTGGGTGAA AAGCTCGCTG
GCGCCGGGCT CCAAGGCCGT TGAGCTGTAT CTGGAAGAAG CCGGCCTCAA GCACGAACTC
GAAAAGCTCG GCTTCGGCAT CGTCGCGTTT GCCTGCACCA CCTGCAACGG CATGAGCGGC
GCGCTGGACC CGAAGATCCA GCAAGAGATC ATCGACCGCG ACCTGTATGC CACAGCCGTG
CTGTCGGGCA ACCGCAACTT CGACGGCCGC ATCCACCCGT ATGCCAAGCA AGCGTTCCTC
GCATCCCCGC CGCTGGTGGT GGCCTATGCG ATTGCGGGCA CGGTACGTTT CGACATCGAG
CGTGACAGCT TCGGCACCGA TGCCAACGGC AAGCCGATTC TGCTGAAGGA CCTGTGGCCG
ACCGACGAAG AGATCGACGC CATCGTGCGT GCGTCGGTCA AGCCGGAGCA GTTCCGCACG
GTGTACATCC CGATGTTCGA GCAGCGCAGC GAAAGCACCG CCAAGGTGAG CCCGCTGTAC
AACTGGCGCC CGCAGAGCAC CTACATCCGC CGCCCGCCAT ATTGGGAAGG TGCGCTGGCT
GGTGAACGCA CGCTCAAGGG CCTGCGCCCG CTGGCCGTGC TGGGCGACAA CATCACGACC
GACCACCTCT CGCCGTCCAA CGCCATCCTG GCCAGCAGCG CCGCCGGTGA ATACCTCGCC
AAGATGGGCC TGCCGGAAGA GGACTTCAAC TCGTACGCCA CGCACCGCGG CGATCACCTG
ACCGCCCAGC GCGCGACGTT TGCCAACCCG ACCCTCATCA ACGAGATGGC CGTGGTGGAT
GGCGCGGTGA AGAAGGGTTC GCTGGCGCGC ATCGAGCCCG AAGGCAAGGT CACGCGCATG
TGGGAAGCCA TCGAGACCTA CATGGACCGC AAGCAACCGC TGATCGTGAT TGCCGGTGCC
GACTACGGCC AGGGCAGCTC GCGTGACTGG GCCGCCAAGG GCGTGCGCCT GGCTGGCGTG
GAAGCCATCG TGGCCGAAGG CTTCGAGCGC ATCCACCGCA CCAACCTGAT CGGCATGGGC
GTGCTGCCGC TGGAGTTCAA GCCGGGCACC ACGCGCCTGA CGCTGAGCAT TGACGGCACC
GAAACGTATG ACGTTATCGG CGAGCGCAAG CCGCGTGCAG ACCTCACGCT CGTCATCCAC
CGCAAGAACG GCGAACGCGT GGAAGTGCCC GTCACGTGCC GTCTGGACAG CGACGAGGAA
GTCTCGATCT ACGAAGCCGG CGGTGTGCTG CAGCGCTTTG CGCAGGACTT CCTTGAGTCT
TCGAAGGAGG CAGCATGA
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| Protein sequence | MNTTHRKPLP GTKLDYFDAR EAVEAIKQGA YDKLPYTSRV LAENLVRRCD PATLTDSLKQ
LIERKRDLDF PWFPARVVCH DILGQTALVD LAGLRDAIAD QGGDPAKVNP VVPVQLIVDH
SLAVECGGFD PDAFAKNRAI EDRRNEDRFH FIDWTKLAFK NVDVIPAGNG IMHQINLEKM
SPVIQAHDGV AYPDTCVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRAS WMRLPDIVGV
ELTGQRQPGI TATDIVLALT EFLRKQKVVG AYLEFYGEGA SKLTLGDRAT ISNMAPEYGA
TAAMFSIDDN TLDYLRLTGR TDEQVKLVET YAKTAGLWSD TLKHAEYERV LRFDLSSVVR
NMAGPSNPHA RVATTDLAAK GIAGKWEETP GQMPDGAVII AAITSCTNTS NPRNVIAAAL
LARNANRLGL TRKPWVKSSL APGSKAVELY LEEAGLKHEL EKLGFGIVAF ACTTCNGMSG
ALDPKIQQEI IDRDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTVRFDIE
RDSFGTDANG KPILLKDLWP TDEEIDAIVR ASVKPEQFRT VYIPMFEQRS ESTAKVSPLY
NWRPQSTYIR RPPYWEGALA GERTLKGLRP LAVLGDNITT DHLSPSNAIL ASSAAGEYLA
KMGLPEEDFN SYATHRGDHL TAQRATFANP TLINEMAVVD GAVKKGSLAR IEPEGKVTRM
WEAIETYMDR KQPLIVIAGA DYGQGSSRDW AAKGVRLAGV EAIVAEGFER IHRTNLIGMG
VLPLEFKPGT TRLTLSIDGT ETYDVIGERK PRADLTLVIH RKNGERVEVP VTCRLDSDEE
VSIYEAGGVL QRFAQDFLES SKEAA
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