| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3970 |
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| Symbol | |
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| ID | 8021658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 547816 |
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| End bp | 549840 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644832758 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_002983898 |
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| Protein GI | 241665539 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0817675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCTTG CGACCGGGAC TCCCTTGTTC GGCCCGACGC GCGCGCTCAC GCACCGCGAG
CACGGTTGGC TGATCGCTCA GCTTGCGATT GTGCTGGCCC CGCTGCTGCG CGCGCTCCCT
CTGGTGACAT GCGCGGTGTT CGGGGTGCTG CTGCTCCTGC GCACGCTGTT GTGGGTGCGC
CGCGCACCGT TGCCGGGTAA ATGGGTGCTG GGGCTGACCG GCCTCGCCAC GCTGCTCGTC
ACGCTGGCGC TGGCCCTGCG CACCGGCGGC AATATCGGGC GCGACCTCTC CGTGGCCCTG
CTGGGCGCGT TTCTCGTGCT CAAGCTCATG GAATCACACA CCGTGCGCAA CGGCATTCTC
GTGACGCAGT TGTGCTGCTT CCTGCTGCTC TCGCAGGTGC TGTTCGACCA GCCGCCGTGG
CTGGCCGCCA CCATGCTGGC GACGGCGGCG CTGTTGCTGC GCAACTGGCT GCTGCTGTTG
CATCCACAGG CGCGCCTGCG CGTCTCGCCG GTGCGTGTGC TGATCCGCTT GGTCGCGATG
GGCCTGCCGT GCGCGGCGGT GCTGTTCCTG CTGTTCCCGC GCCTGGACCA CCCGCTCTGG
AGCCTGCCGC GATCCGCCGA AACCGGCACC AGCGGTATCT CCGACCGCAT GGCACCGGGT
TCGATCGGCC AACTGATCCT GTCGGACGAA CTCGCCTTCC GTGCCGACTT CAGCGGTACG
CCGCCCCCGC TCGACACGCT CTATTGGCGC GGCATGGTGT TGTGGCGTTT TGACGGCCAG
GCATGGACTG CCGTCTCGAT TCGGCAGCGG CCTGCGCGTG GGGGCGTACC CGATTCTGCG
GACAGCGCAG GCGCCGTGCC CGACGCCGTC AACTACAACA TCACGCTGGA GGCGACGCAC
CAGCGCTGGC TGTTCGCACT CGATCGTGGC GTGTCGATCG ACGCACGCGA CGACATTGGC
CGCAGTATCG ATTCGGAGTT CATCAGCAAG CAGCCGCTCG ACCAGCGGAT GCGCTACCAC
GCGCGTTCGC GCCTGCCCGA TCGCAATCGC GTGGACGATG CACAGCCGCT CGATCCGTTC
ACGCAGCAGT TGGCGCTCGC GCTGCCGCCC GGCAACCCGC AGGCACGTGC GCTTGCCGCG
CAGTGGGCCG GGTTGCCGCC CGCCGAGCGT GTGTCGGCCG CACTCAGGCT GTTTGGTCGC
GCCCCGTTTG CCTACACGCT CCAACCCGAG CCCCTGCAGG GCCAGCAGAT CGACGATTTC
CTCTTTCGCA CACACCGCGG CTTCTGTGAG CACTACGCGG GCAGCTTTGT CTTCCTGATG
CGCGCGGCGG GCGTGCCGGC ACGCGTGGTG GTGGGCTACC TCGGCGGCGA GGTGAACGCC
ATGAGCGGCG ACATCATCGT GCGTCAGTCC GATGCGCACG CGTGGGCGGA GGTGTGGCTG
GCCGGCCGTG GCTGGGTGCG CGTGGACCCG ACCGCCGCCG TCGCGCCGCA GCGCGTCGAG
CGCGGGCTGG CCGCCGCCGT TCCTGCCAGC GAGTTCCGCT CGCGCCGCGT GGAGGAGCCC
ACGTGGCTGC GCAGCGTGCG CTGGGGGCTG GACGGCCTCA TCAGCGGCTG GAACCGCTGG
GTGCTCGGCT ACGACCGCAC TCGGCAGGCC CAGCTGTTCG CATGGCTCGG CCTGGATGCC
GCCGACCCGC GTGCGGTCCT GTGGGGTGTG TCGGCGATCT TTCTGCTGGC CGCATTGCCC
CTGTTGTGGC AGCAGCGCAA GCCCAGGCTT GATCCGGTGC AGGCGCAGTG GCAACGTCTG
TGCGACCGCC TGGCACGGCA CGGATGTGCA CGCGGTCCGG CGGAAGGGCC CATCGCCTAC
GCCGAGCGTG CCGCCGCGCA GTTTCCAGCA GCGGCACCAG CGCTGCGACA GGCCGCCGCC
GGCTATGTCG CCCTCCGCTA CGGCCGTGAC GATGGTGACG CTCGGGCGCG GGCGCAGCGT
TTCACCGAGT GGCGCACTGC CCTCGCGCGA GTCCGCCTGC GCTAA
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| Protein sequence | MSLATGTPLF GPTRALTHRE HGWLIAQLAI VLAPLLRALP LVTCAVFGVL LLLRTLLWVR
RAPLPGKWVL GLTGLATLLV TLALALRTGG NIGRDLSVAL LGAFLVLKLM ESHTVRNGIL
VTQLCCFLLL SQVLFDQPPW LAATMLATAA LLLRNWLLLL HPQARLRVSP VRVLIRLVAM
GLPCAAVLFL LFPRLDHPLW SLPRSAETGT SGISDRMAPG SIGQLILSDE LAFRADFSGT
PPPLDTLYWR GMVLWRFDGQ AWTAVSIRQR PARGGVPDSA DSAGAVPDAV NYNITLEATH
QRWLFALDRG VSIDARDDIG RSIDSEFISK QPLDQRMRYH ARSRLPDRNR VDDAQPLDPF
TQQLALALPP GNPQARALAA QWAGLPPAER VSAALRLFGR APFAYTLQPE PLQGQQIDDF
LFRTHRGFCE HYAGSFVFLM RAAGVPARVV VGYLGGEVNA MSGDIIVRQS DAHAWAEVWL
AGRGWVRVDP TAAVAPQRVE RGLAAAVPAS EFRSRRVEEP TWLRSVRWGL DGLISGWNRW
VLGYDRTRQA QLFAWLGLDA ADPRAVLWGV SAIFLLAALP LLWQQRKPRL DPVQAQWQRL
CDRLARHGCA RGPAEGPIAY AERAAAQFPA AAPALRQAAA GYVALRYGRD DGDARARAQR
FTEWRTALAR VRLR
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