Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3963 |
Symbol | |
ID | 8021651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 541281 |
End bp | 541715 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832751 |
Product | Glyoxalase/bleomycin resistance protein/dioxygenase |
Protein accession | YP_002983891 |
Protein GI | 241665532 |
COG category | [R] General function prediction only |
COG ID | [COG3565] Predicted dioxygenase of extradiol dioxygenase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00112812 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0292714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG TCACGCCTGT CCTTGCCCCT TTTCACCTCG CGTTCCCGGT GCACGACATT GCCGCAGCAC GCGCGTTCTA CGGTGGGGTC CTCGGCTGTC CGGAGGGCCG CAGCGCGCCG GACTGGGTCG ATTTCAATTT TTACGGCCAT CAGATCGTCG CGCATCTGGC ACCCGAGGAG GCCGGCCATC GCAAGACCAG CGCCGTCGAT GGTGACGCCG TGCCGGTGCG GCATTTCGGC GTCGTGCTGT CCATGCCGGA GTGGGATGCC GCCGCCAACA AGCTGCGCGC TGCGGGCGTC GACTTCATCA TCGAGCCGCA CATCCGCTTC AAGGGCGAGG TGGGCGAGCA GGCCACGATG TTCTTCCTCG ATCCGTCGGG CAACGCGCTG GAGATCAAGG CATTCGCCAA CATGGCATCG CTGTTCGCCA AGTGA
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Protein sequence | MSDVTPVLAP FHLAFPVHDI AAARAFYGGV LGCPEGRSAP DWVDFNFYGH QIVAHLAPEE AGHRKTSAVD GDAVPVRHFG VVLSMPEWDA AANKLRAAGV DFIIEPHIRF KGEVGEQATM FFLDPSGNAL EIKAFANMAS LFAK
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