Gene Rpic12D_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3963 
Symbol 
ID8021651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp541281 
End bp541715 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID644832751 
ProductGlyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_002983891 
Protein GI241665532 
COG category[R] General function prediction only 
COG ID[COG3565] Predicted dioxygenase of extradiol dioxygenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00112812 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0292714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG TCACGCCTGT CCTTGCCCCT TTTCACCTCG CGTTCCCGGT GCACGACATT 
GCCGCAGCAC GCGCGTTCTA CGGTGGGGTC CTCGGCTGTC CGGAGGGCCG CAGCGCGCCG
GACTGGGTCG ATTTCAATTT TTACGGCCAT CAGATCGTCG CGCATCTGGC ACCCGAGGAG
GCCGGCCATC GCAAGACCAG CGCCGTCGAT GGTGACGCCG TGCCGGTGCG GCATTTCGGC
GTCGTGCTGT CCATGCCGGA GTGGGATGCC GCCGCCAACA AGCTGCGCGC TGCGGGCGTC
GACTTCATCA TCGAGCCGCA CATCCGCTTC AAGGGCGAGG TGGGCGAGCA GGCCACGATG
TTCTTCCTCG ATCCGTCGGG CAACGCGCTG GAGATCAAGG CATTCGCCAA CATGGCATCG
CTGTTCGCCA AGTGA
 
Protein sequence
MSDVTPVLAP FHLAFPVHDI AAARAFYGGV LGCPEGRSAP DWVDFNFYGH QIVAHLAPEE 
AGHRKTSAVD GDAVPVRHFG VVLSMPEWDA AANKLRAAGV DFIIEPHIRF KGEVGEQATM
FFLDPSGNAL EIKAFANMAS LFAK