| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3952 |
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| Symbol | |
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| ID | 8021640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 530378 |
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| End bp | 531454 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644832741 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002983881 |
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| Protein GI | 241665522 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.142509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTACC TTGTCCGCAG CGCCAGCCTG ACCGGATACG CCGAAGCCGC CCGCGCGGGC
GGGCTGGACC CGTTCCGCAT GCTGGCGGAG GTGGGGCTTC CGGCGGACAG CCTGTCTGAT
GTCGACCTCA AGATTCCGGC CGACAAGGTG GGCAGGCTGC TTGAGCTGTC TGCCCAGCGC
AGCGGCATCG AAACATTTGG CCTGCGGATG GCGGAGACAC GGCGCGCGTC GAACCTCGGT
CCATTGATCC TCCTCGTGCG TGACGAGCCG ACGCTGCGCC AGGCATTGCA GGCGATGGCG
CGCTACGGCC ATCTGCACAA CGAGGCGATC TTTCTTCACG TCGAAGAAGA AGACGGCATT
GCGGTCATCC GTGACGAGGT GCTGGCCAGC GACGTTGGAT CGCTCAAGCA GGCGACCGAG
CTGGTTGTAG GGGTGCTGTT CCGGCTGCTG CGCTTCTTCC TTGGTGATGA TTGGCACCCC
AAGACCGTCC TTTTTGCGCA TGCCGCGCCG AAAGACCGCT CCGTGCATGC CCGTGTCTTT
GGCTCAAACG TGGAGTTCGG CCATGCGTTC AGCGGCATTG TCTGTAACGC CAGCGACCTG
GACCTGCCGC TGCCCTCGGC TGATCCCGTC ATGGCACGCT ACGTTCGCCG CTACCTGAAT
GATCTTGACC CGGAGGGCGG CAAGCGGATG TCGGACGAGG TCCGCCAGAT GGTGATCATG
CTGCTACCGT CCGGCCGTGC CACGGTCGAC CATATCGCGC GGCATCTGGG TGTCAACCGA
CGCACCATTC ATCGTCATCT CACGCAGGAA GGCACCACGT TTTCATCGAT TCTCGACGCC
GTGCGCAGCG AGCTTGCCGT GCGCTACCTG GACCAGGGTG AGCGCCAATG CGCCGAGATC
TCGGGCTTTT TGGGCTTCTC GGAGCCGAGT GCGTTCACAC GATGGTTCAG GGGAACGTTC
GGATGCAGCC CGACGCAGTT CAAGGTGTCG AAAGCCAGCG CGTTTGACAA AGGCATGATC
AGCCGAAGCC ATGCGGGCGA TCAGAAGAAG AAGACGCGGC GATCGCGTCT TTCGTGA
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| Protein sequence | MPYLVRSASL TGYAEAARAG GLDPFRMLAE VGLPADSLSD VDLKIPADKV GRLLELSAQR
SGIETFGLRM AETRRASNLG PLILLVRDEP TLRQALQAMA RYGHLHNEAI FLHVEEEDGI
AVIRDEVLAS DVGSLKQATE LVVGVLFRLL RFFLGDDWHP KTVLFAHAAP KDRSVHARVF
GSNVEFGHAF SGIVCNASDL DLPLPSADPV MARYVRRYLN DLDPEGGKRM SDEVRQMVIM
LLPSGRATVD HIARHLGVNR RTIHRHLTQE GTTFSSILDA VRSELAVRYL DQGERQCAEI
SGFLGFSEPS AFTRWFRGTF GCSPTQFKVS KASAFDKGMI SRSHAGDQKK KTRRSRLS
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