Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3949 |
Symbol | |
ID | 8021637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 527622 |
End bp | 529238 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832738 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002983878 |
Protein GI | 241665519 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.169877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCG CCCATATCGA CACCTTCGCC CGCGACCGGC TGCCGCCGGC GGAGCTGCAA CCGGTGTATC GCTTCGACCT GCCAGCGCTG CAGTTTCCGC CGCAGCTCAA CTGCGCCACC GAACTGCTCG ACCGCCGTGT TGCCGCGGGC GAGGGCGGCC GCCTTTGCAT CCAGGCGACC GGCATCCGCT GGACGTACGC CGACCTGCAG GCGCACGCCA ACCGCATCGC CAACGTGCTG GTCAATGAGA TGGGCGTCGT GCCGGGCAAC CGCGTGCTGC TGCGCTCGCC CAACAGCCCG ATGCTCGCCG CCTGCTGGTT TGCCGTGATG AAAGTGGGTG CGATTGCGGT GACCACCATG CCGCTGCTGC GCGCCAAAGA GCTGGGGCAG ATTCTGGGCA AGGGCGAGAT TGGCTTCGCG CTGTGCGATG CGCGGCTCGT CGACGAGCTA CGCGATGCCG TGACGCAAGC GGCCAAGCCC GTGCAACTGC TGTGCTTTCA CGATGACACG CCGGAAGGGC TGGAGGCGGC CATGGTGCGC CAGCCGGCCA CCTTCACCAA CGTCGATACG GCGGCGGACG ACACGTGCCT GCTCGCCTTC ACGTCGGGCA CGACGGGCGT GCCGAAAGCG ACGATGCATT TTCATCGCGA CATCCTCGCC ATTTGCGCGT GCTGGCCGCC GCACGTGCTG CAGCCGCGCG CGGACGACAT CTTCATCGGC AGCCCGCCGA TGGCGTTCAC GTTCGGGCTC GGCGGTCTGC TGCTGTTTCC GATGAGCGTG GGTGCATCGA CGGTGCTGCT GGAAAAGGCA TCGCCGAACG ATCTGGTCGA TGGCATCCGC ACGTTTGGCG CGACGGTGCT GTTTACGGCG CCCACCACGT ACCGCATCAT CGCGGCGCGC GGAGACGAGT TGCGTGCCAC GCCGCTGCGC CGCTGTGTGT CGGCCGGCGA GGCGCTGCCG GTGGCCACGC GCACGCTGTG GAAGGACGCC ACCGGCATCG AGCTGATTGA CGGCATTGGC GCGACCGAGA TGCTGCATAT CTTTATCTCC GCTGCCGACG CCGACGTGCG CCCAGGCGCC ACCGGCAAGG CCGTCCCCGG CTATGTCGCA CAAGTCGTGG ATGATGCAGG CAACCCTGTG CCGCCGGGCA CGGTGGGCCG CCTGGCGGTG CAAGGCCCGA CCGGCTGCCG CTACCTGGCC GATGACCGCC AGCGCGCCTA CGTGCGCAAC GGCTGGAACC TCACGGGGGA TGCCTATGTG ATGGACGAGG AAGGCTACTT CCACTACCAC TCGCGCACCG ACGACATGAT CATCTCGTCC GGCTACAACA TTGCCGCGCC CGAGGTGGAA GACGCGCTGA TGCAGCATCC GGCCGTGGCC GAGTGTGGCG TGATCGGCGA GCCCGACGAA GAGCGCGGGC AGATCGTCAA GGCCTTCGTT GTATTGCACC CGGGCCACTC GGCGGGGCCG GAGATGGTCA AGACGCTGCA GGACTTCGTG AAGCAGACCG TGGCCCCGTA CAAGTATCCG CGCGCCATCG AGTTCCGTAC GAGCCTGCCG CGCAGTGAAG TCGGCAAGCT GCTGCGCTAC CGCCTGCGCG AACACGACAA ATCATGA
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Protein sequence | MPSAHIDTFA RDRLPPAELQ PVYRFDLPAL QFPPQLNCAT ELLDRRVAAG EGGRLCIQAT GIRWTYADLQ AHANRIANVL VNEMGVVPGN RVLLRSPNSP MLAACWFAVM KVGAIAVTTM PLLRAKELGQ ILGKGEIGFA LCDARLVDEL RDAVTQAAKP VQLLCFHDDT PEGLEAAMVR QPATFTNVDT AADDTCLLAF TSGTTGVPKA TMHFHRDILA ICACWPPHVL QPRADDIFIG SPPMAFTFGL GGLLLFPMSV GASTVLLEKA SPNDLVDGIR TFGATVLFTA PTTYRIIAAR GDELRATPLR RCVSAGEALP VATRTLWKDA TGIELIDGIG ATEMLHIFIS AADADVRPGA TGKAVPGYVA QVVDDAGNPV PPGTVGRLAV QGPTGCRYLA DDRQRAYVRN GWNLTGDAYV MDEEGYFHYH SRTDDMIISS GYNIAAPEVE DALMQHPAVA ECGVIGEPDE ERGQIVKAFV VLHPGHSAGP EMVKTLQDFV KQTVAPYKYP RAIEFRTSLP RSEVGKLLRY RLREHDKS
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