| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3945 |
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| Symbol | |
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| ID | 8021633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 524167 |
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| End bp | 524949 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644832734 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002983874 |
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| Protein GI | 241665515 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.136099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAC CTGCAATGCT CACCGGGCAC CACGCCGTCG TTACTGGCGC AGGGCGCGGG
ATTGGCGCTG CGATTGCCGC GCAACTCGCG GCGCATGGCG CCACGCTCAC GCTGATGGGT
CGCAACGCCG ATGTGCTGCA CGCCACTGCC AAGACGTTGC CTGACAGCGC CCGCGCGCAA
GTCGTGACGT GCGATGTGAC CGACGAGGCG AGCGTGTCGG CGGCGTTCGA ATCTGCACGC
GCGGGGCTTG GCCCCATCTC CATCCTCGTC AACAACGCGG GCCAGGCCGA GAGCGCATCG
TTTGCCAAGA CCACGCTCGA CCAATGGCAG CGCATGCTGG CCGTGAACCT GACGGGCACG
TTCCTGTGCA CGCAGGCGGC GCTGCCCGAT GTGCAGGCGT CGGGCCGCGG CCGCATCGTG
AACATTGCCA GCACGGCGGG GCAGCGCGGT TATGCGTATG TGTCGGCGTA TGTGGCCGCC
AAGCATGGCG TCATTGGCCT AACGCGCTCG CTGGCGCTGG AGCTGGCGGC GCGCGGCGTC
ACCGTCAACG CAGTCTGCCC CGGCTATACG GAAACCGACA TCGTGCGCGA GAGCATCGAC
CGCATCGTCG CCCGCACCGG CCGCAGCGAA GAAGAAGCGC GGGCCGAGCT GGTGAAGGGC
AACCCGCAGG GCCGGCTGAT CACGCCAGAC GAAGTGGCGA ATGCCGTGGT GTGGCTGTGC
TCCGATGGCG CGTCGTCGAT CACGGGCCAG GCCATCTCGG TATCCGGCGG GGAGGTGATG
TGA
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| Protein sequence | MATPAMLTGH HAVVTGAGRG IGAAIAAQLA AHGATLTLMG RNADVLHATA KTLPDSARAQ
VVTCDVTDEA SVSAAFESAR AGLGPISILV NNAGQAESAS FAKTTLDQWQ RMLAVNLTGT
FLCTQAALPD VQASGRGRIV NIASTAGQRG YAYVSAYVAA KHGVIGLTRS LALELAARGV
TVNAVCPGYT ETDIVRESID RIVARTGRSE EEARAELVKG NPQGRLITPD EVANAVVWLC
SDGASSITGQ AISVSGGEVM
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