Gene Rpic12D_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3944 
Symbol 
ID8021632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp521787 
End bp524165 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content65% 
IMG OID644832733 
Productsalicylyl-CoA 5-hydroxylase 
Protein accessionYP_002983873 
Protein GI241665514 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.134026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG TCTGTATTGG TGGTGGGCCG GCCGGCCTGT ACTTTGCCCT GCTGATGAAG 
CTGCAGGACC CGTCGCACGA CATCACCGTG GTGGAGCGCA ACCGGCCGTA TGACACGTTC
GGCTGGGGCG TGGTGTTCTC CGACCAGACG CTGGGCAACC TGCAGCGCGC CGACGCCAAG
AGCGCCGCGC AGATCCTCGA CGCCTTCAAC CACTGGGACG ACATTGAGGT GCACATCCGC
GGGCAGGTCG TGCGCTCGGG CGGGCACGGC TTCTGCGGCA TCGGGCGCAA GCGCCTGCTG
AACATCCTGC AGGCGCGCTG TGAGGAAGAG GGCGTCAAGC TCGTCTTTGA AACGGATGTG
CAAGATCAGG ATTTGGAAAA CGACGGGGCC TACGTCGATG CCGACCTCAT CATCGCCAGC
GACGGCCTGA ACAGCCGCAT CCGCACCAAG TACGCCGCCA CGTATCAACC CGATATCGAC
ACGCGCCGCT GCCGCTTTGT CTGGCTGGGC ACACACAAGC TGTTCGAGGC CTTCACGTTT
GCGTTTGAAG AGACCGAGCA CGGCTGGTTC CAGGCGCATG CGTACCGTTT TGACGACGAG
ACCTCCACCT TCATCGTCGA GGCACCCGAG GAAGTGTGGC GCGCCGCCGG GCTGGAGACC
ATGGAGAAGG AAGAGGCCAT CGCATACTGC GAGCGGCTCT TCGCCAAGTA CCTCGACGGC
AACAAGCTGA TCTCCAACGC CACGCACCTG CGGGGCTCTG CGCAGTGGAT TCGCTTTCCG
CGCGTGGTTT GCCGGCATTG GGTGCATACC AACGCGCACG GCACGCCGGT GGTGCTGATG
GGCGACGCCG CGCACACGGC GCATTTCTCG ATCGGCTCCG GCACCAAGCT GGCGCTGGAA
GATTCGATTG AACTGGCGCG CAGCATCGGC CAGCACCCCG GCGATTTGCG TGCCGCGCTT
GAGCACTACG AGGCAGTGCG CAGCGTGGAA GTGCTGCGCA TCCAGAACGC CGCGCGCAAC
TCGACCGAGT GGTTTGAAAA CGTAGACCGC TACGCCAACC TGCCGACCGA GCAATTTGCG
TATTCGCTGC TCACGCGCAG CCAGCGCATC AGCCACGAAA ACCTGCGTCA GCGCGACAAG
CGTTATCTCG AACAGTTTGA AGACTGGATT GCCGAGCAGG CCGGCGCCCC GCGCGGGCCG
CAGCACGGCC CCGTGCCGCC GATGTTCACG CCCTTCACGG TGCGTGACGT CACGCTCAAG
AACCGCGTGG TGGTGTCGCC CATGGCGCAG TACTCGTGCG AAGACGGTCA GCCGGCGGAT
TACCACCTCG TCCACCTGGG CGCGCGCGCC ATGGGGGGCG CCGGCCTGGT GATGGCCGAG
ATGACCTGTG TGTCGCCCGA TGCGCGTATC ACCCCGGGCT GCCCGGGCTT GTGGAACACC
GACCAGCGCG ACGGCTGGGC GCGCATCGTG CAGTTCGTGC ATGCCAACAG CGATGCGAAG
CTCGGCATCC AGCTCGGGCA TGCCGGAGCC AAGGGCTCGA CGCGCGTGGC GTGGGAGGGC
ATCGATCTGC CGCTGGAAGA CGGGCAGAAC TGGGCGCTGA TCTCGGCATC GCCGCAGCAG
TACCTGGATG GCGTGAGCCA GTGGTCGCGC GCCATGACGC GCGACGACAT GGATCGCGTG
CGTGACGACT TTGTTCACGC CGCGCGCCTG GCAGCTGAAG CCGGATTCGA CTGGCTGGAG
CTGCACTGTG CGCATGGCTA TCTGCTGTCA TCGTTCATCT CGCCGTTGAC GAATCAGCGC
AATGACGAAT ATGGCGGCAC GCTGGACAAC CGGCTGCGCT TTCCGCTCGA AGTCTTCCAC
GCGGTGAGGG AGGTGTGGCC TAGCAACAAG CCGATGTCGG TGCGGATTTC GGCGCACGAC
TGGGTGGAGG GCGGCATTAC GCCAGACGAT GCGGTGGAAA TTGCCCGCGT CTTCAAGGCC
GCAGGCGCGG ACATGATCGA TTGCTCATCG GGCCAGGTCA GCAAGAAGGA GCAGCCCGTG
TATGGCCGCA TGTTCCAGAC GCCGTTTGCC GACCGCGTGC GCAACGAGGC GGGCATCGCC
ACGATTGCGG TGGGCGCCAT CTCCGAGGCG GACCACGTCA ACAGCATCAT CGCGGCCGGC
CGTGCCGACC TGTGCGCCGT GGCGCGCCCG CACCTCGCCA ACCCGGCCTG GACGCTGAAC
GAAGCTGCGC GCATCGGCTA TCTCGACATG CCGTGGCCCA AGCAATACCG CGCAGGCAAG
CTGCAGTTGG AGCGCAACCT GGAGCGCGAG CGCGCGATGG CGGCGCAGGC AGCGGGGCTG
TCTCCGCTGG AGCAGGCCAA CCGCATGCAG GGGGTTTGA
 
Protein sequence
MKIVCIGGGP AGLYFALLMK LQDPSHDITV VERNRPYDTF GWGVVFSDQT LGNLQRADAK 
SAAQILDAFN HWDDIEVHIR GQVVRSGGHG FCGIGRKRLL NILQARCEEE GVKLVFETDV
QDQDLENDGA YVDADLIIAS DGLNSRIRTK YAATYQPDID TRRCRFVWLG THKLFEAFTF
AFEETEHGWF QAHAYRFDDE TSTFIVEAPE EVWRAAGLET MEKEEAIAYC ERLFAKYLDG
NKLISNATHL RGSAQWIRFP RVVCRHWVHT NAHGTPVVLM GDAAHTAHFS IGSGTKLALE
DSIELARSIG QHPGDLRAAL EHYEAVRSVE VLRIQNAARN STEWFENVDR YANLPTEQFA
YSLLTRSQRI SHENLRQRDK RYLEQFEDWI AEQAGAPRGP QHGPVPPMFT PFTVRDVTLK
NRVVVSPMAQ YSCEDGQPAD YHLVHLGARA MGGAGLVMAE MTCVSPDARI TPGCPGLWNT
DQRDGWARIV QFVHANSDAK LGIQLGHAGA KGSTRVAWEG IDLPLEDGQN WALISASPQQ
YLDGVSQWSR AMTRDDMDRV RDDFVHAARL AAEAGFDWLE LHCAHGYLLS SFISPLTNQR
NDEYGGTLDN RLRFPLEVFH AVREVWPSNK PMSVRISAHD WVEGGITPDD AVEIARVFKA
AGADMIDCSS GQVSKKEQPV YGRMFQTPFA DRVRNEAGIA TIAVGAISEA DHVNSIIAAG
RADLCAVARP HLANPAWTLN EAARIGYLDM PWPKQYRAGK LQLERNLERE RAMAAQAAGL
SPLEQANRMQ GV