Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3944 |
Symbol | |
ID | 8021632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 521787 |
End bp | 524165 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832733 |
Product | salicylyl-CoA 5-hydroxylase |
Protein accession | YP_002983873 |
Protein GI | 241665514 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.134026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTG TCTGTATTGG TGGTGGGCCG GCCGGCCTGT ACTTTGCCCT GCTGATGAAG CTGCAGGACC CGTCGCACGA CATCACCGTG GTGGAGCGCA ACCGGCCGTA TGACACGTTC GGCTGGGGCG TGGTGTTCTC CGACCAGACG CTGGGCAACC TGCAGCGCGC CGACGCCAAG AGCGCCGCGC AGATCCTCGA CGCCTTCAAC CACTGGGACG ACATTGAGGT GCACATCCGC GGGCAGGTCG TGCGCTCGGG CGGGCACGGC TTCTGCGGCA TCGGGCGCAA GCGCCTGCTG AACATCCTGC AGGCGCGCTG TGAGGAAGAG GGCGTCAAGC TCGTCTTTGA AACGGATGTG CAAGATCAGG ATTTGGAAAA CGACGGGGCC TACGTCGATG CCGACCTCAT CATCGCCAGC GACGGCCTGA ACAGCCGCAT CCGCACCAAG TACGCCGCCA CGTATCAACC CGATATCGAC ACGCGCCGCT GCCGCTTTGT CTGGCTGGGC ACACACAAGC TGTTCGAGGC CTTCACGTTT GCGTTTGAAG AGACCGAGCA CGGCTGGTTC CAGGCGCATG CGTACCGTTT TGACGACGAG ACCTCCACCT TCATCGTCGA GGCACCCGAG GAAGTGTGGC GCGCCGCCGG GCTGGAGACC ATGGAGAAGG AAGAGGCCAT CGCATACTGC GAGCGGCTCT TCGCCAAGTA CCTCGACGGC AACAAGCTGA TCTCCAACGC CACGCACCTG CGGGGCTCTG CGCAGTGGAT TCGCTTTCCG CGCGTGGTTT GCCGGCATTG GGTGCATACC AACGCGCACG GCACGCCGGT GGTGCTGATG GGCGACGCCG CGCACACGGC GCATTTCTCG ATCGGCTCCG GCACCAAGCT GGCGCTGGAA GATTCGATTG AACTGGCGCG CAGCATCGGC CAGCACCCCG GCGATTTGCG TGCCGCGCTT GAGCACTACG AGGCAGTGCG CAGCGTGGAA GTGCTGCGCA TCCAGAACGC CGCGCGCAAC TCGACCGAGT GGTTTGAAAA CGTAGACCGC TACGCCAACC TGCCGACCGA GCAATTTGCG TATTCGCTGC TCACGCGCAG CCAGCGCATC AGCCACGAAA ACCTGCGTCA GCGCGACAAG CGTTATCTCG AACAGTTTGA AGACTGGATT GCCGAGCAGG CCGGCGCCCC GCGCGGGCCG CAGCACGGCC CCGTGCCGCC GATGTTCACG CCCTTCACGG TGCGTGACGT CACGCTCAAG AACCGCGTGG TGGTGTCGCC CATGGCGCAG TACTCGTGCG AAGACGGTCA GCCGGCGGAT TACCACCTCG TCCACCTGGG CGCGCGCGCC ATGGGGGGCG CCGGCCTGGT GATGGCCGAG ATGACCTGTG TGTCGCCCGA TGCGCGTATC ACCCCGGGCT GCCCGGGCTT GTGGAACACC GACCAGCGCG ACGGCTGGGC GCGCATCGTG CAGTTCGTGC ATGCCAACAG CGATGCGAAG CTCGGCATCC AGCTCGGGCA TGCCGGAGCC AAGGGCTCGA CGCGCGTGGC GTGGGAGGGC ATCGATCTGC CGCTGGAAGA CGGGCAGAAC TGGGCGCTGA TCTCGGCATC GCCGCAGCAG TACCTGGATG GCGTGAGCCA GTGGTCGCGC GCCATGACGC GCGACGACAT GGATCGCGTG CGTGACGACT TTGTTCACGC CGCGCGCCTG GCAGCTGAAG CCGGATTCGA CTGGCTGGAG CTGCACTGTG CGCATGGCTA TCTGCTGTCA TCGTTCATCT CGCCGTTGAC GAATCAGCGC AATGACGAAT ATGGCGGCAC GCTGGACAAC CGGCTGCGCT TTCCGCTCGA AGTCTTCCAC GCGGTGAGGG AGGTGTGGCC TAGCAACAAG CCGATGTCGG TGCGGATTTC GGCGCACGAC TGGGTGGAGG GCGGCATTAC GCCAGACGAT GCGGTGGAAA TTGCCCGCGT CTTCAAGGCC GCAGGCGCGG ACATGATCGA TTGCTCATCG GGCCAGGTCA GCAAGAAGGA GCAGCCCGTG TATGGCCGCA TGTTCCAGAC GCCGTTTGCC GACCGCGTGC GCAACGAGGC GGGCATCGCC ACGATTGCGG TGGGCGCCAT CTCCGAGGCG GACCACGTCA ACAGCATCAT CGCGGCCGGC CGTGCCGACC TGTGCGCCGT GGCGCGCCCG CACCTCGCCA ACCCGGCCTG GACGCTGAAC GAAGCTGCGC GCATCGGCTA TCTCGACATG CCGTGGCCCA AGCAATACCG CGCAGGCAAG CTGCAGTTGG AGCGCAACCT GGAGCGCGAG CGCGCGATGG CGGCGCAGGC AGCGGGGCTG TCTCCGCTGG AGCAGGCCAA CCGCATGCAG GGGGTTTGA
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Protein sequence | MKIVCIGGGP AGLYFALLMK LQDPSHDITV VERNRPYDTF GWGVVFSDQT LGNLQRADAK SAAQILDAFN HWDDIEVHIR GQVVRSGGHG FCGIGRKRLL NILQARCEEE GVKLVFETDV QDQDLENDGA YVDADLIIAS DGLNSRIRTK YAATYQPDID TRRCRFVWLG THKLFEAFTF AFEETEHGWF QAHAYRFDDE TSTFIVEAPE EVWRAAGLET MEKEEAIAYC ERLFAKYLDG NKLISNATHL RGSAQWIRFP RVVCRHWVHT NAHGTPVVLM GDAAHTAHFS IGSGTKLALE DSIELARSIG QHPGDLRAAL EHYEAVRSVE VLRIQNAARN STEWFENVDR YANLPTEQFA YSLLTRSQRI SHENLRQRDK RYLEQFEDWI AEQAGAPRGP QHGPVPPMFT PFTVRDVTLK NRVVVSPMAQ YSCEDGQPAD YHLVHLGARA MGGAGLVMAE MTCVSPDARI TPGCPGLWNT DQRDGWARIV QFVHANSDAK LGIQLGHAGA KGSTRVAWEG IDLPLEDGQN WALISASPQQ YLDGVSQWSR AMTRDDMDRV RDDFVHAARL AAEAGFDWLE LHCAHGYLLS SFISPLTNQR NDEYGGTLDN RLRFPLEVFH AVREVWPSNK PMSVRISAHD WVEGGITPDD AVEIARVFKA AGADMIDCSS GQVSKKEQPV YGRMFQTPFA DRVRNEAGIA TIAVGAISEA DHVNSIIAAG RADLCAVARP HLANPAWTLN EAARIGYLDM PWPKQYRAGK LQLERNLERE RAMAAQAAGL SPLEQANRMQ GV
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