Gene Rpic12D_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3938 
Symbol 
ID8021626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp517110 
End bp518180 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content62% 
IMG OID644832727 
Productarsenical-resistance protein 
Protein accessionYP_002983867 
Protein GI241665508 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.135184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTCT CAAACGTAGC CCCACCGAAC AACGTCATTG CGAAGCCCGC GATCAACTTC 
TTCGAGCGTT ATCTGACGGT CTGGGTCGCG CTGTGCATCG TCGTTGGCAT GGCGCTTGGG
CAGGTGTTTC CTGGCGTCTT CCAGCGCATC GGCCGCATGG AGTATGCGCA GGTCAACCTG
CCCGTCGGGT TGCTGATCTG GGTAATGATC ATCCCGATGC TCGTCAAGGT CGACTTCGGC
GCGTTGCATG AGGTGCGTCA GCACATCAGG GGGATCGGCG TCACGCTCGT GGTGAACTGG
CTCGTCAAAC CGTTCTCGAT GGCATTTCTC GGCTGGCTTT TCATCAAGCA GCTCTTTGCG
CCGATGCTGC CCGCCGCGCA GCTCGACAGT TACATCGCCG GCCTGATCCT GCTCGCTGCC
GCGCCGTGCA CGGCGATGGT CTTCGTCTGG AGCCGGTTGA CCGGTGGGGA TCCGCTCTTC
ACCCTGTCGC AAGTCGCGCT GAACGACAGC ATCATGGTGA TCGCGTTCGC GCCGCTGGTC
GGCCTGCTGC TGGGCATGTC GGCGATCACC GTGCCATGGG CAACGCTGCT CACGTCAGTG
GTGCTCTACA TCGTGATTCC GGTGCTTCTG GCACAGGCCC TGCGTAAGGC CCTGCTTGCC
AAAGGACAGC CTGCATTGGA CGCGGTCATG GCAAGGATCG GCCCGTGGTC CATCACCGCG
CTGCTGGCGA CGCTCGTGCT GCTGTTCGCG TTCCAGGGCG AGGCGATTCT CAAGCAGCCG
CTGGTCATTG CCTTGCTTGC CGTGCCGATC CTGATTCAGG TGCTCTTCAA CTCGGCGCTC
GCCTACTGGC TCAATCGTGC GGTCGGCGAA AAGCACAGCG TCGCGTGCCC GTCGGCGCTC
ATTGGTGCGT CCAACTTTTT CGAGCTGGCG GTCGCTGCCG CGATCAGCCT CTTCGGTTTC
CATTCTGGGG CGGCACTCGC GACGGTCGTC GGCGTGCTGA TTGAAGTCCC GGTCATGCTG
TTGGTCGTGC GGATCGTCAA CCAATCCAAA GGTTGGTACG AACGCGCTTG A
 
Protein sequence
MHLSNVAPPN NVIAKPAINF FERYLTVWVA LCIVVGMALG QVFPGVFQRI GRMEYAQVNL 
PVGLLIWVMI IPMLVKVDFG ALHEVRQHIR GIGVTLVVNW LVKPFSMAFL GWLFIKQLFA
PMLPAAQLDS YIAGLILLAA APCTAMVFVW SRLTGGDPLF TLSQVALNDS IMVIAFAPLV
GLLLGMSAIT VPWATLLTSV VLYIVIPVLL AQALRKALLA KGQPALDAVM ARIGPWSITA
LLATLVLLFA FQGEAILKQP LVIALLAVPI LIQVLFNSAL AYWLNRAVGE KHSVACPSAL
IGASNFFELA VAAAISLFGF HSGAALATVV GVLIEVPVML LVVRIVNQSK GWYERA