Gene Rpic12D_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3931 
Symbol 
ID8021619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp510672 
End bp511397 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID644832720 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_002983860 
Protein GI241665501 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.280482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATC CGAACAGCTT TTCCGGCACG GCGTTCCTGC TTGCCGACCC CGCGCGTGCC 
GCCATGCTCA CCGCCCTGCT TGACGGGCAC GCGTTGCCTG CGGGCGAGCT TGCCCATGCG
GCTGGTATCA CCGCGCAGAC GGCCAGCACG CACCTGGCCA AGTTGCTCGA CGGTGGCTTG
GTGGTGGTGG AAACCGAGGG GCGCCACAAG TACTTCCGGT TAGCGGGCGA GCATGTGGCG
CAAGCGCTGG AACATCTGGC CGCGATCACG CCCTCGGCCG TGGTACGCCG GACCACGCCC
AGCCCGACAG CGCGCGAACT GGGCTTCTGC CGCTGCTGCT ATGACCACCT TGCGGGGCAG
GTAGGCGTAG CCGTCACACA GGCGCTGCAA TCACACGGCT ATCTGCTGCC GATGCCAGAC
AAGCAATACG AGATCACGCC CGCGGGCATC GCGTGGTTTG GCGACGTGGG GCTCAATGTG
CAGGACATCC GCCCGACGCG ACGCGGCCTG GCGCGGCAAT GCCTGGACTG GACCGAGCGC
GCGCACCACC TGGCGGGGCC GTTGGGCGTG CATTTCCTGC GTCGTCTGTG CGATGCGGGT
TGGATGCTGC GGGCACGCAA CTCACGCGCG GTGCTGGTCA CGCCCAAGGG CTGGCAAGAA
CTGCATCAGC GCCTGGGCGT GGATGAAGCA ACGGTGCGCA GCGACGCCGG ACATCGTCAT
GCATAG
 
Protein sequence
MSHPNSFSGT AFLLADPARA AMLTALLDGH ALPAGELAHA AGITAQTAST HLAKLLDGGL 
VVVETEGRHK YFRLAGEHVA QALEHLAAIT PSAVVRRTTP SPTARELGFC RCCYDHLAGQ
VGVAVTQALQ SHGYLLPMPD KQYEITPAGI AWFGDVGLNV QDIRPTRRGL ARQCLDWTER
AHHLAGPLGV HFLRRLCDAG WMLRARNSRA VLVTPKGWQE LHQRLGVDEA TVRSDAGHRH
A