| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3929 |
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| Symbol | |
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| ID | 8021616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 508678 |
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| End bp | 509346 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644832717 |
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| Product | Fimbrial protein |
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| Protein accession | YP_002983858 |
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| Protein GI | 241665499 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.19818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGATTCG TGGAACAGGG GCAAGGTCAG AGTGTCAACA TAGCGGATAT GACGCAGGCC
ACAACCACAT GGGAGATCGA TGGTGCATCA ACGACATATT GGTCTGTCAC TGGTCCGCTC
TTGCTTCGTA TCAAGAAGAT CGGCCAAGTC GGGGCGGATG CTAGTGTTCC GTGCTGCGTA
CTTGGCTATC ACACCGTAGA CAATCAAATC ACTCCACTCA CGTACAAAAC GAGTAATACA
TCGACAGTCG CCACGCGCAG CTGCAAGACG CCCAGCGTCA CAGTCAAGAT GGGCGACCAG
AACGAGGTGA GGGGCTTCCA GGGTGTCGGC ACATCACTGT CTCCCGTCAG TTTTTCCATT
GCCTTGAAAG AATGCCCTGA AGGTCTCAAC AAGGTGTCGT ACCAACTGAA CCCCAACTCG
GCCATTGTGG ATGCATCGCG TTCGGTTGTC GCGCTCGATG CCGGCTCGAC CGCCAAGGGC
GTGGGCGTGC AGTTGCTCAA CAGCGCGGGC AATCCGGTAG CTTTAAAGAC CAAGCTCCAA
TTTGCGCAAT ACGACAAGCA GGGCGGTAAC TTCAACATTC CGTTGCAGGC GGCTTATTAC
CAGACTGCCA ATCAAATCGT GCCCGGTACA GCCAATACTT CTGTCGCGTT TGTGATGGGC
TACAACTAG
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| Protein sequence | MGFVEQGQGQ SVNIADMTQA TTTWEIDGAS TTYWSVTGPL LLRIKKIGQV GADASVPCCV
LGYHTVDNQI TPLTYKTSNT STVATRSCKT PSVTVKMGDQ NEVRGFQGVG TSLSPVSFSI
ALKECPEGLN KVSYQLNPNS AIVDASRSVV ALDAGSTAKG VGVQLLNSAG NPVALKTKLQ
FAQYDKQGGN FNIPLQAAYY QTANQIVPGT ANTSVAFVMG YN
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