| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3923 |
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| Symbol | |
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| ID | 8021610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 502267 |
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| End bp | 503010 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644832711 |
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| Product | Pili assembly chaperone, N-terminal |
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| Protein accession | YP_002983852 |
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| Protein GI | 241665493 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.358656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.566628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA AACGATGCGC CGCTGGCGCG GCGTTGGCGT GCGCGTTGGC TGCGTCCGCG
AGTCACGCCA GCATTTCCCT CAGCACCACC CGGTTGATTT TCGACGGCAA GAACAAGGAA
ACGTCCGTGG TCGTCAACAA CGATGGTGCT GATGCACTGA TCCAAGCGTG GCTCGACCCG
CTTGACGAAG GCGCCAACAG CCAACTGCCG TTTGCCATTA CCCCGCCGCT GGCCAAGGTG
GCAGCAAAGC AGCAGCAACT GCTGCGTGTG TTGTACGAAG GCGTAGGCAT GCCGACCGAC
CGCGAGTCGG CCTTCTGGCT GAATGTACAA GAGGTTCCGC AGACCGCCCA TAACGACAAC
GTGTTGCAGC TGGCGGTCCG CCAGCGCATC AAGGTGTTCT ATCGACCGGC CGGTCTGAAC
GCAGACCCAC AGAAGGCCCC GGCGAGCCTG CAATGGCAAC TGAACCAGGA TGGTGGCAAG
GCGATGCTGC GTCTGAGCAA CCCGAGCCTC TACCACGTGA CCGTGGTGGA CGCAAAGGTG
CACGGCGGCA GCGCAGAAGA GTCAGTCATC GATGCCAAGA TGGTCGCGCC AAATTCCACG
GTGACGCTGC CCGTGAAGCT GCCGACCAAC GCCGCCGCAC CCGAGCTGCG CTACGACGTC
ATCAATGACT ACGGTGGCCG ACAAAGCTAC CGCGTCACCC TGCACGGCAG CCAGCCGAGC
ACGCCGGTTT CCACCGGCAA TTGA
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| Protein sequence | MKAKRCAAGA ALACALAASA SHASISLSTT RLIFDGKNKE TSVVVNNDGA DALIQAWLDP
LDEGANSQLP FAITPPLAKV AAKQQQLLRV LYEGVGMPTD RESAFWLNVQ EVPQTAHNDN
VLQLAVRQRI KVFYRPAGLN ADPQKAPASL QWQLNQDGGK AMLRLSNPSL YHVTVVDAKV
HGGSAEESVI DAKMVAPNST VTLPVKLPTN AAAPELRYDV INDYGGRQSY RVTLHGSQPS
TPVSTGN
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