Gene Rpic12D_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3914 
Symbol 
ID8021601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp489483 
End bp490877 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content67% 
IMG OID644832702 
ProductChloride channel core 
Protein accessionYP_002983843 
Protein GI241665484 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CGCCGCCTCC ATCCCCCCCT CCATTGCCAC GCCCGGCGTG GTGGCAGCGT 
GTGGCCGCGC GATTGCCATT CGGGCGCGTG CACCTGGTGT TCGTATTCGC GGGCCTGATC
GGCTGCGCGG GGGCGTTCTC GACGATTCTC TTCCGCGAGT GCCTGCGGCA ATTGCAGTGG
TGGATTTCCG GCACCGACCA GGGCCTGGTG GCTACGGCGC GAGCGCTGCC CTGGTGGGCG
CGGCTGCTGG TGCCGACCGT GGGTGGCATC CTCGCAGGCT TGACGCTTCA GTTCGGTCTG
AAGTGGATTC CGCGCAAGGG TTCGGAAGAC TACATGGAGG CCATTGCCGT GGGCGACGGC
GTGCTGAGCG CTCGGCAGAG CCTGGTGCGC AGTGCGTCGT CGCTGTGCTC GGTGGCCAGC
GGTGCGTCCA TCGGGCGCGA GGGGCCGATG GTGCAGCTTT CGGCGATGTG CGGTTCGCTG
TTGGGCCGGG CGTTACGGCG CGTGATGCCG GTTTCGGTCG AGCAGCTGCG GCTGCTGGTC
GCGTGTGGGG CGGCAGCGGG TATCACCTCG GCTTACAACG CGCCCATCGC GGGCGCCGTG
TTTGTCTGCG AGATCGTTTT CGGTGTCATC ACCACGGCAA CGCTCGGGCC GCTGCTGGTA
GCAGCCGTCA CCGCCGATAT CGTGCTGCGC CAGTTCTTCG GCTATGGCGC GGTCTACGAG
ATGCCGCATT TCGATTTCGT CTCTGGCTGG GAAGTGCTGA CGTATCTGGG GCTGGGGCTG
GCGGCCGGGA TGGCTGGCCC CTTGCTGCTG GGCTTGATCG ATCGCGCGCG CGATGCGTTC
TCCCGGACGA AGCTGCCGCT GACGTTGCGG CTGGCCGTAG GCGGGCTGAT TGTTGGCGTG
CTGTCGACAC GGGTACCAGA GGTCTGGGGC AATGGATACA GCGTGGTCAA CGGTTTCCTG
CACGAGCCGT GGCTGTGGCA GACAGTGGCG CTCGTGCTGA TCTGCAAGGT GGCGGCCACA
GCGGCCAGCG CCGGCTCGGG CGCAGTCGGT GGCGTGTTCA CGCCCACGCT GTTTTGCGGC
GCGGCGCTGG GGCTGCTCTA TGGCACCGGC ATGCACGCCT TGCTGCCCGG CGCGGCGCCG
GTGCCGATCA GTTACGCGGT GGTGGGCATG GGCGCGCTGC TGGCCGCCAC CACGCACGCG
CCGCTCATGT CGATCCTGAT GATTTTCGAG ATGACGCTGT CATATCAAGT GGTACTGCCG
CTGATGCTCG CCTGCATTAC CGGCTACGTC ACGGCGCATG CGACAGGCGC ACCGTCGGTG
TACGCACGTG CACTGGCGCG CAATCGTGAC GACGCGCAGC ATCTGCCATC GGCTTCGGAA
GCTACGCAGA AATAG
 
Protein sequence
MTDTPPPSPP PLPRPAWWQR VAARLPFGRV HLVFVFAGLI GCAGAFSTIL FRECLRQLQW 
WISGTDQGLV ATARALPWWA RLLVPTVGGI LAGLTLQFGL KWIPRKGSED YMEAIAVGDG
VLSARQSLVR SASSLCSVAS GASIGREGPM VQLSAMCGSL LGRALRRVMP VSVEQLRLLV
ACGAAAGITS AYNAPIAGAV FVCEIVFGVI TTATLGPLLV AAVTADIVLR QFFGYGAVYE
MPHFDFVSGW EVLTYLGLGL AAGMAGPLLL GLIDRARDAF SRTKLPLTLR LAVGGLIVGV
LSTRVPEVWG NGYSVVNGFL HEPWLWQTVA LVLICKVAAT AASAGSGAVG GVFTPTLFCG
AALGLLYGTG MHALLPGAAP VPISYAVVGM GALLAATTHA PLMSILMIFE MTLSYQVVLP
LMLACITGYV TAHATGAPSV YARALARNRD DAQHLPSASE ATQK