Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3907 |
Symbol | |
ID | 8021594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 483543 |
End bp | 484424 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832695 |
Product | inner-membrane translocator |
Protein accession | YP_002983836 |
Protein GI | 241665477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAC AGCAACTCGT CAACGCGCTG TCGCTCGGCT GCGTGTATGC GTTGTTCGCC CTGGGGTTCA CGCTGGTTTT CGGCATCCTG GGCGTGATCA ACCTGTCGCA CGGCGCCGTC TTCATGCTCG GCGCCTATGC GGCACTGCAG GTCGTGACGC ACTTTGAGCT GCCGCTGTGG GCGGCACTGG CTGTCGGCTT TGTCGTAAGC GGCGTGGCCG GGCTCATCAT CGATGTGCTG CTGCTGCGCC CGCTGCGCCG GCGCAACGCG CCGCACCTGA TCCCGATGAT CGGGACCATC GGTGCGGGCA TCGCCATCAA TAACGCCATG CAGGGCGTGT TCGGGGCGGA GAACCTGCGC TTCCCGGCGG GGCTTGTGTC GGATGCGTCG CTGGATCTGG GCGGCATCCA TCTCATGCCG CTGGAACTGG GCATCATCGT GCTGTCGTTT GCGCTGATGG CCGGGCTGAT GCTGCTGCTC AAGCGCACGC AACTGGGCCG CGCGCTGCGC GCGATTGCAG AGTCGCCCAA GGCGGCGGCG CTGCTCGGCA TCAATGTCGA AGGACTGTTC CTGCTGACCT CGTTTGCGGC CGCGGCGCTG GGCGGGTTGT CGGGCGTGCT GATCGGCCTG TACTCCAACG CCGTGTTCCC GTTGATGGGC CAGCCGATGC TGCACAAGGG CATCGCGGTC ATCATCCTGG GCGGCCTGGG CGATATCCGC GGCGCCATGC TGGGCGGGCT GTTCCTCGGG TTTGCCGAGG TGCTGTCGGT GGCCTACATC GGCTCGACGA TGCGCGATGC CGTGGCGTTC GGCCTGTTGT TCCTGATCCT GCTGGTGCGG CCGCAAGGGC TGTTCGGCAA GGTGCTGGAA CGCAAGGCAT AA
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Protein sequence | MLEQQLVNAL SLGCVYALFA LGFTLVFGIL GVINLSHGAV FMLGAYAALQ VVTHFELPLW AALAVGFVVS GVAGLIIDVL LLRPLRRRNA PHLIPMIGTI GAGIAINNAM QGVFGAENLR FPAGLVSDAS LDLGGIHLMP LELGIIVLSF ALMAGLMLLL KRTQLGRALR AIAESPKAAA LLGINVEGLF LLTSFAAAAL GGLSGVLIGL YSNAVFPLMG QPMLHKGIAV IILGGLGDIR GAMLGGLFLG FAEVLSVAYI GSTMRDAVAF GLLFLILLVR PQGLFGKVLE RKA
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