Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3902 |
Symbol | |
ID | 8021589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 476349 |
End bp | 477707 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832690 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_002983831 |
Protein GI | 241665472 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC ACGCCACTCC CGACATGTCT TCCATCGACC ACGCCCCTGT CTTCCTGATC GAGGATGATG ATGTGGTTCG CTTGGGCTGC GAGCAAGCGC TCGCGCTGGC GGATGTGCCG GTGCAGTCTT TTGCCGATGC AGAAAGCGCG CTGGCCGCCC TGGCGGCGCA GACGCCCGCC GTGGTCGTGA CCGACGTGCG GCTGCCGGGC CGCGACGGTC TGGCCGTACT GCGCGAGATG CTGCAGCACG ATCGCCAGTT GCCGGTCATC CTCATCACCG GCCATGGCGA TGTGACGATG GCCGTGGCCG CCATGCGCGC CGGTGCCTAC GATTTCATGG AGAAGCCTTT CCACTCCGAA CGCCTGGTCG ACGTGGTGCG ACGTGCGCTG GAAAAACGCA GGCTCACGGC AGAAAACCTG CGCCTGCGCG AGGCGCTGCA GGGCCGTCAG GCCTATCCGC TGATCGGTCA GAGCGCGGCC ATGCAGAACG TGCGGCGGCT GGTTGCCGCG CTCGCCCCAA CGGACGCCGA CATCCTCGTC ACTGGCGAGA CCGGCTCGGG CAAGGAAGTG CTCGCGCGTG CCATCCACGA AGGTAGCCGG CGGCGCGGGC CTTTTGTTGC GCTCAACTGT GCGGCACTGC CGGAATCCGT GTTCGAAAGC GAAATGTTCG GACACGAGGC AGGCGCCTTC ACCGGTGCCA ACCGCCGCCG CATCGGCAAG ATGGAATATG CCAATGGCGG CACGCTGTTC CTCGACGAGA TCGAATCGAT GCCACTCGCC TTGCAGGCGA AACTCCTGCG CGCGTTGCAG GAGCGCAGTA TCGAGCGGTT GGGAAGCAAC GCCAGCGTGC CGATCGATTG CCGTGTGGTA GCGGCGGCCA AGGTGGACCT GAAGGAGGCG TCTGACCGCG GAGCCTTCCG CGCGGATCTG TACTACCGGC TGAATGTGGT ATCGATCGCG CTGCCGCCGC TGCGCCAGCG CGCAGAAGAT ATCCCTTTGC TGATGGCTTA TTTCCTGCAA CAGGCGGCGG TTCGTTACGA TCGTCCCGTG CCGGACTGGT CGGCGCAGGA CATGATGCGC TGGCAGCACC ACGATTGGCC CGGCAATGTG CGTGAGCTGA AGAACGTCGC CGAGCGTTTC TGCCTGGGGC TGGACGACGG CCTGATGGCT TCGGAGGCGA GCCAGCATTC ATTGGCGGGC CGCATGATGG CAGTCGAACG CGCCACGATT GAAGAGGCGT TGCGTGCCAC TGAAGGCAAC GTTGCCCGCA CCGCCGACCT GCTCGCCGTG CCGCGCAAGA CGCTCTATGA CAAGCTGAAC CGGCACGGCA TCGAGCCGGA CCGTTTCCGC TCCAGCTAA
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Protein sequence | MTEHATPDMS SIDHAPVFLI EDDDVVRLGC EQALALADVP VQSFADAESA LAALAAQTPA VVVTDVRLPG RDGLAVLREM LQHDRQLPVI LITGHGDVTM AVAAMRAGAY DFMEKPFHSE RLVDVVRRAL EKRRLTAENL RLREALQGRQ AYPLIGQSAA MQNVRRLVAA LAPTDADILV TGETGSGKEV LARAIHEGSR RRGPFVALNC AALPESVFES EMFGHEAGAF TGANRRRIGK MEYANGGTLF LDEIESMPLA LQAKLLRALQ ERSIERLGSN ASVPIDCRVV AAAKVDLKEA SDRGAFRADL YYRLNVVSIA LPPLRQRAED IPLLMAYFLQ QAAVRYDRPV PDWSAQDMMR WQHHDWPGNV RELKNVAERF CLGLDDGLMA SEASQHSLAG RMMAVERATI EEALRATEGN VARTADLLAV PRKTLYDKLN RHGIEPDRFR SS
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