Gene Rpic12D_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3897 
Symbol 
ID8021584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp469489 
End bp470496 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content58% 
IMG OID644832685 
ProductparB-like partition protein 
Protein accessionYP_002983826 
Protein GI241665467 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA AGCTGAAATC GCTCAAGGCT GGGATGCTGG CCGGGATTGC GGCAGAAAAG 
ACAAAAGCGG CGCCGGTCGA TCGCTTTGCG CTCGCAGAGC AAGCCATTGT GTCGCATCCG
CGCGGTTTGC TCGGCCAACC TGCCGCCCCG ACTTTCAGCG CTGAAAGTGC CGAGTCGGCC
AATACATCCG AGCGGCGCGT CATCAAGATT CCGCTGGACC GGCTACACGA AAATCCGCTC
AACGCTCGTC GTATCTACGA CCCTCAAACC GTTCAGGAGC GGGCTGCCTC CATTGCCACG
CATGGCCAGC AGACCCCAGG ACTTGCGGCG CCCCATCCAA GCAAGCCAGG TTGGTATGTC
CTCATCGACG GTCACTATCG CAAACGTGCC TTGGCGGCTG CCGGCAAAGC GGAGATGGAT
TGCTTTGTCG AAGAGGGCTT ATCTGACATC GATTTCTACC GACTCTCCTT CGTCCTGAAT
GAGCAGCGCT CGGGGCAGTC GGTGCTGGAT AACGCCATCG CGTGGCGGCA GTTGCTAGAT
GAAGGAAAAG TCAAAAAAGA AGAAGATATT TGTGAGATTA CCGGCGTGTC AGCGGGTACC
GTCAACAAGA CCTTGGCACT GCTGAAGTTG CCGGACTCGG TGCTTGACGT GATGAAGGAG
CGTCCGGCTG GTATTGGCAT TGCGACTGGC TATGAACTGA CGCTGTACTG CAAGAGTGCG
GGTGAGGAGC GAACGCGCGA GCTTGTGCAT CGCGTGTTGG AAGAAGGCCT GTCAAGCCGT
GATGTGGAGC AGATTCGGAA AATCGCCCAG GAAGGACGGA CGCGCAAAGT CAAGGAAGTC
AGCCGCCAGT ACAAGATTCG TAACAGCGAA GGTGATCTAC TAGGCACAAT CAAGGAGTGG
GATTCCGGCC GCGTCATGTT GGATGTGAAG CTGAGTGACC GCGCGGCCCG CGAATCCTTG
GTGGAAGCGT TGAAAAGCCG CTTCGGGCTA GACGTGGCCC TCCTATAG
 
Protein sequence
MSGKLKSLKA GMLAGIAAEK TKAAPVDRFA LAEQAIVSHP RGLLGQPAAP TFSAESAESA 
NTSERRVIKI PLDRLHENPL NARRIYDPQT VQERAASIAT HGQQTPGLAA PHPSKPGWYV
LIDGHYRKRA LAAAGKAEMD CFVEEGLSDI DFYRLSFVLN EQRSGQSVLD NAIAWRQLLD
EGKVKKEEDI CEITGVSAGT VNKTLALLKL PDSVLDVMKE RPAGIGIATG YELTLYCKSA
GEERTRELVH RVLEEGLSSR DVEQIRKIAQ EGRTRKVKEV SRQYKIRNSE GDLLGTIKEW
DSGRVMLDVK LSDRAARESL VEALKSRFGL DVALL