Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3888 |
Symbol | |
ID | 8021575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 457933 |
End bp | 459252 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644832676 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_002983817 |
Protein GI | 241665458 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCGCC CGCGCGGAAC AGGGCGCACC ACGTTCCTTG CCATGTCCGA CCCGCTTCCG ACCCACTCGA CGCAGGCGCC TCCAGGCCCC GGGCCGGCGC CCCAGCCGAC GCTATTGACC GGCCTCCAGC AGCCGGCGTG GCGGCTGGCG ATGGTGCTGG TCGCCATTGG CGGCACGCTG GTCTTCCTGC AGTGGGCCCG CGTGTTCCTG GTGCCGCTTA CGTTTGGTGT GGTGCTCGCA TTTGCGCTGA ATCCGCTGGT GGTACGCCTG CAGCATTGGT ATGTGCCGCG CCCCGTGGCA GCGGCTGTCA TCGTGCTTGG CTTGTGGCTC GCAGGCGGTG CGGTGGTCTT CGGCATGCAG GATGGCGTGT CTGCCGTGGC CGAGCGCGTT CCGCTGGCGG CAGAGCGCAT GGCTGAATCG GTCGATCGGG TCCGTGATCG CCTGAGCGGT GCAGTGGACA AGATGCGGCA AGTGACGACG GCCGTCGAGC ATGCGACCGA AGGCGTGCCG GCCAAGCCGC CGTCGCAGCC TGCACGGCGT CCGGCGGCAG CCGCGCCACC CGCGCCACAC GACACGCTGC CGGTATTGCC CCTGCGCGAG TTCGTGTGGA CAGGATCGGC CAGCCTGTTT GCCCTGGCCG GGCAACTGGT GGTGGTCTCG TTCCTCGTGT ACTTCCTGCT CGCTTCCGGG CAGGCGCTCA AGCGCAAATG GGTACGGGCG GTTGGTCGCA CCCTGAGCGA GAAGAAGCGG GCGGTGCGGA TGATGGCCGG GATCGGCACC CAGATCCAAT ACTCGCTGCT GGTGCTCTTC GCCAGCAACA TCATGCTGGG GATCCTGACG GCCGTGGCCT TTGCGCTTCT GGGTATGGAC GACGCGACGG TGTGGGGCCT GGCGGCGGCC GTGTTGCACT TCGTGCCGTA CCTCGGTTCG GTCGTGATGG TGGTGGCCAG CGGCATCGGC GCCTATCTGC AGATGGGCAC CTGGGCGGAT GCGTTGATCG TGGCGGGAAC GACCCTCGTG TTTGCCACGC TGGTCGGCAC GTTGCTCATG ACCTGGCTGC AGAGCCGTGC GTCCAAGCTG GACCCGTGCG TGGTCTATAT CGGGTTGCTG CTGTGGGGCT GGCTGTGGGG AGTGTGGGGG TTGCTGCTGG GGACCTCTGT CACGGCAATG ATCAAGGTGG TGTGCGATCA CGTCGAGCGG CTGCGCCCGC TTGGCGTCCT GCTTGGCACG ACCGACGCGC CCGCGGGGGT ATGGCAACGC CTGCTCGATC GTCTGCGCGG CAGGCCGACA CGGCGCCGGC AAGGCGCGCC GCGGCGTTGA
|
Protein sequence | MPRPRGTGRT TFLAMSDPLP THSTQAPPGP GPAPQPTLLT GLQQPAWRLA MVLVAIGGTL VFLQWARVFL VPLTFGVVLA FALNPLVVRL QHWYVPRPVA AAVIVLGLWL AGGAVVFGMQ DGVSAVAERV PLAAERMAES VDRVRDRLSG AVDKMRQVTT AVEHATEGVP AKPPSQPARR PAAAAPPAPH DTLPVLPLRE FVWTGSASLF ALAGQLVVVS FLVYFLLASG QALKRKWVRA VGRTLSEKKR AVRMMAGIGT QIQYSLLVLF ASNIMLGILT AVAFALLGMD DATVWGLAAA VLHFVPYLGS VVMVVASGIG AYLQMGTWAD ALIVAGTTLV FATLVGTLLM TWLQSRASKL DPCVVYIGLL LWGWLWGVWG LLLGTSVTAM IKVVCDHVER LRPLGVLLGT TDAPAGVWQR LLDRLRGRPT RRRQGAPRR
|
| |