Gene Rpic12D_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3864 
Symbol 
ID8021551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp437744 
End bp438673 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content68% 
IMG OID644832652 
Producttriphosphoribosyl-dephospho-CoA synthase 
Protein accessionYP_002983793 
Protein GI241665434 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1767] Triphosphoribosyl-dephospho-CoA synthetase 
TIGRFAM ID[TIGR03132] triphosphoribosyl-dephospho-CoA synthase MdcB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.516158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGA CATTGCAACG GCCCCTGCCG GCCAGCCCGA AAGCACGCGC GAAGCGATTG 
GCCGCGCTGG TCGAGTCTGC CCTCATCGAC GAGGTGACGC TGTCGCCCAA ACCCGGTCTG
GTGGATGTGC GTGGCAACGG CGCACATCAC GATCTGGACT GGACGCTGAT GGTGCATTCC
GCCCAGACCC TGCGCCCCGC GTTTGAAGCC ATGGCATTGG CTGGCGCGCA GATCGAAACG
CAAGCCGGCG CACAACTCGC GCTGCGCGAG CGCATCGGCC GCCTGGGCCG CGAAGGCGAA
GCGGCCATGT TCGATGCCAC CGGCGGCATC AACACGCATC GCGGTGCCAT CTGGGCGCTT
GGTCTGCTGG TCACGGCAGC CGCACAAGCG CCGCATGCAT TGAGCGCAGC CGCTGTTGCG
GGGCGCGCGG CGCAACTGGC CAACATCCCG GATCGCTTTG CGCCTGTCTC CACTGGCCAC
AAGGGCGAGC GCGCCTGCAA TGACTACGGC GTCGGCGGTG CGAAGGGCCA GGCCTGTGCC
GGCTTTCCGC ACGTGATCAA GGTCGCCCTG CCGGCGTTGC ACCATGCACG CGCTGCAGGC
ATTCGCGAAG ACCATGCGCG CGTGGATGCA TTGCTTGCCG TCATGGCTGC GCTGGACGAC
ACCTGCGTGC TCGCACGCGG CGGCGCCAAG GCACTGCACG TCGTGCAAAC CGGTGCGGCC
ACCGTGCGCG CAGAAGGCGG CTTGGCCACA GCGCAAGGCC GTCGCGCTTT CCGCACGCTT
GAACAAGACA TGCTAGCGCT GCACGTGTCG CCCGGCGGCG CGGCCGACCT GCTGGCTGCC
GCACTCTTCC TCGACCGCCT GCCGACAGAC GCGCGCGTAG CGTCTGACAC CGAATCCGCT
CATCAGGAAA CCGAACATGG AGCAGCTTGA
 
Protein sequence
MEKTLQRPLP ASPKARAKRL AALVESALID EVTLSPKPGL VDVRGNGAHH DLDWTLMVHS 
AQTLRPAFEA MALAGAQIET QAGAQLALRE RIGRLGREGE AAMFDATGGI NTHRGAIWAL
GLLVTAAAQA PHALSAAAVA GRAAQLANIP DRFAPVSTGH KGERACNDYG VGGAKGQACA
GFPHVIKVAL PALHHARAAG IREDHARVDA LLAVMAALDD TCVLARGGAK ALHVVQTGAA
TVRAEGGLAT AQGRRAFRTL EQDMLALHVS PGGAADLLAA ALFLDRLPTD ARVASDTESA
HQETEHGAA