| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3863 |
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| Symbol | |
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| ID | 8021550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 436056 |
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| End bp | 437744 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644832651 |
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| Product | malonate decarboxylase, alpha subunit |
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| Protein accession | YP_002983792 |
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| Protein GI | 241665433 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCGA TGCCCGCCCA ATCGGCAAAC GGGGCCAACG CACCCATCCC GCCGCAATGG
CGCCGCCGAC ACGACGAGAA AGAACGCCGC CTGGCCGCAG CCCGCCGCAT CGCCAACGGC
AAGGTCATCC CCACTGGCGA CATCGTCGCC GCGCTCGAAG CGCTGCTCGC CCCGCGCGAC
CGCGTCGTGC TGGAAGGTAA CAACCAGAAG CAGGCGGATT TCCTCTCGCG CTCGCTGGCC
AAGGTGAACC CCGAGCGCCT GCACGATCTG CACATGATCA TGCCCAGCGT GAGCCGCGCC
GAGCACCTCG ACATTTTTGA AGCCGGCATC GCGCACAAGC TCGACTTCTC GTTTGCCGGG
CCGCAAAGCC TGCGCATCAG CCAGTTGCTG GCCGATGGGC TGCTGGAAGT CGGCGCCATC
CACACCTACA TCGAGCTGTA TGCACGGCTG GTGGTGGACC TGATCCCCAA CGTGTCGCTG
GTGGCCGGTT TCAAGGCCGA CCGCGACGGC AACATCTACA CCGGCCCGAG CACCGAAGAC
ACGCCCGCGC TGGTCGAGCC CACTGCGTTT TCCGACGGCA TCGTCATCGT GCAGGTCAAC
GAGATCGTCG ATGACCCGGC CGACCTGCCG CGCGTCGACA TTCCCGGCTC GTGGGTCGAC
TTCATCGTGC AGGCCGACAA GCCGTTCTAC ATCGAGCCGC TCTTCACGCG CGACCCGCGC
CTCATCAAGC CCGTGCACGT GCTGATGGCG ATGATGGCGA TTCGCGGCAT CTACCAGCGG
CACAATGTGC AGTCGCTCAA CCACGGCATC GGCTTCAACA CCGCTGCCAT CGAGCTGATC
CTGCCAACGT ACGGCGAACG CCTGGGCCTC AAGGGCAAGA TCTGCCGCAA CTGGACGCTG
AACCCGCATC CGACGTTGAT TCCCGCCATT GAATCCGGCT GGGTGGAAAG CGTGCACTGC
TTCGGCACCG AGCTGGGCAT GGAGCGCTAC GTGGCCGCGC GCCCCGATGT GTTCTTCACC
GGGCGTGACG GCTCGCTGCG CTCGAACCGC ATGCTGTGCC AGCTCGCCGG CCAATATGCG
GTGGACCTCT TCATTGGCGC GACGCTGCAG GTGGATGGCG ACGGGCATTC GTCCACCGTC
ACGCGCGGTC GGCTGGCCGG TTTTGGCGGC GCGCCCAACA TGGGCCACGA CCCGCGCGGC
CGCCGCCACG CCACGCCTGC GTGGCTCGAC ATGACCGAAC CCGTGACGAT GCTCGAGCGC
GGCAAGAAGC TCGTCGTGCA GATGGTCGAA ACGTTCCAGG AAGGCGGCAA GCCGACCTTT
GTCGACACGC TGGATGCGGT GGCCGTGGCC AAGCAGAGCG GCATGCCGCT GGCGCCCATC
ATGATCTACG GCGACGACGT CACGCACCTG CTGACCGAAG ACGGCATCGC GTATCTCTAC
AAGGCCCGCT CGCTGGAAGA GCGGCGCGCG ATGATTGCAG CGGTGGCGGG CGTCACGTCG
ATCGGCCTGC GGCATGACCC ATCCAAGACC GAGCAGATGC GCCGCGACGG CCTGATCGCC
CTGCCCGAAG ACCTCGACGT GCGCCGCAGC GATGCCAGCC GCGAGCTGCT CGCCGCCAAG
AGCATCGCCG ACCTGGTCGA ATGGTCGGGC GGCCTGTACG ACCCGCCTGC ACGCTTCCGG
AGCTGGTAA
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| Protein sequence | MQPMPAQSAN GANAPIPPQW RRRHDEKERR LAAARRIANG KVIPTGDIVA ALEALLAPRD
RVVLEGNNQK QADFLSRSLA KVNPERLHDL HMIMPSVSRA EHLDIFEAGI AHKLDFSFAG
PQSLRISQLL ADGLLEVGAI HTYIELYARL VVDLIPNVSL VAGFKADRDG NIYTGPSTED
TPALVEPTAF SDGIVIVQVN EIVDDPADLP RVDIPGSWVD FIVQADKPFY IEPLFTRDPR
LIKPVHVLMA MMAIRGIYQR HNVQSLNHGI GFNTAAIELI LPTYGERLGL KGKICRNWTL
NPHPTLIPAI ESGWVESVHC FGTELGMERY VAARPDVFFT GRDGSLRSNR MLCQLAGQYA
VDLFIGATLQ VDGDGHSSTV TRGRLAGFGG APNMGHDPRG RRHATPAWLD MTEPVTMLER
GKKLVVQMVE TFQEGGKPTF VDTLDAVAVA KQSGMPLAPI MIYGDDVTHL LTEDGIAYLY
KARSLEERRA MIAAVAGVTS IGLRHDPSKT EQMRRDGLIA LPEDLDVRRS DASRELLAAK
SIADLVEWSG GLYDPPARFR SW
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