Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3856 |
Symbol | |
ID | 8021543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 427376 |
End bp | 427852 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832644 |
Product | protein of unknown function DUF305 |
Protein accession | YP_002983785 |
Protein GI | 241665426 |
COG category | [S] Function unknown |
COG ID | [COG3544] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.422416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTAC GCTCGGTGCC GCTTCCACGC ACGTTGCTGC TCGCTGTGCT CGCCCTCATG TCAAGCATCG GAGCACACGC CGCGCTTGCG CAAGAAGCAC CTCCACAGGC CAATCGCGAG CAGGCCTTCC TTGCCGAGAA CGATGTCGCC ATGGGCAAGA TGATGGACGG GATGGCCCCC AGGCCCAGCG GCAACATCGA CCAGGATTTC GTGGCGATGA TGACGCCGCA TCACCAGGGC GCCATTGACA TGGCCGTGGC CTACCTGCGC TACGGCCAGA ACGAACAGCT GCGCCGCATC GCGCAGGAAA TTGTCGTCTC GCAACAGCAG GAGATTGCAG CGATGCGCCT GGCGCTTGGC CAGCCGCTGC CCCCATCTGC ACCGGCACCC ACGCAGCTCG GTGCCGCCTC TACCACAACC GCACCCGCGT CCCATGCGGC GCATCACGCC CACACCACCC GCCAACAGGA AGATTGA
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Protein sequence | MSLRSVPLPR TLLLAVLALM SSIGAHAALA QEAPPQANRE QAFLAENDVA MGKMMDGMAP RPSGNIDQDF VAMMTPHHQG AIDMAVAYLR YGQNEQLRRI AQEIVVSQQQ EIAAMRLALG QPLPPSAPAP TQLGAASTTT APASHAAHHA HTTRQQED
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