Gene Rpic12D_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3856 
Symbol 
ID8021543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp427376 
End bp427852 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content65% 
IMG OID644832644 
Productprotein of unknown function DUF305 
Protein accessionYP_002983785 
Protein GI241665426 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.422416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAC GCTCGGTGCC GCTTCCACGC ACGTTGCTGC TCGCTGTGCT CGCCCTCATG 
TCAAGCATCG GAGCACACGC CGCGCTTGCG CAAGAAGCAC CTCCACAGGC CAATCGCGAG
CAGGCCTTCC TTGCCGAGAA CGATGTCGCC ATGGGCAAGA TGATGGACGG GATGGCCCCC
AGGCCCAGCG GCAACATCGA CCAGGATTTC GTGGCGATGA TGACGCCGCA TCACCAGGGC
GCCATTGACA TGGCCGTGGC CTACCTGCGC TACGGCCAGA ACGAACAGCT GCGCCGCATC
GCGCAGGAAA TTGTCGTCTC GCAACAGCAG GAGATTGCAG CGATGCGCCT GGCGCTTGGC
CAGCCGCTGC CCCCATCTGC ACCGGCACCC ACGCAGCTCG GTGCCGCCTC TACCACAACC
GCACCCGCGT CCCATGCGGC GCATCACGCC CACACCACCC GCCAACAGGA AGATTGA
 
Protein sequence
MSLRSVPLPR TLLLAVLALM SSIGAHAALA QEAPPQANRE QAFLAENDVA MGKMMDGMAP 
RPSGNIDQDF VAMMTPHHQG AIDMAVAYLR YGQNEQLRRI AQEIVVSQQQ EIAAMRLALG
QPLPPSAPAP TQLGAASTTT APASHAAHHA HTTRQQED