Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3837 |
Symbol | |
ID | 8021524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 407054 |
End bp | 408601 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644832627 |
Product | xylose transporter ATP-binding subunit |
Protein accession | YP_002983768 |
Protein GI | 241665409 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.623686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.377794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTA ACGGCACCCT GTTCGAGATG CGCAACATCG TGAAGTCGTT CTCCGGTGTG CGCGCGCTCG ACGGCGTCAG CCTGGCAGTC AAGCCAGGCG AATGCGTCGG TCTGTGCGGG GAGAACGGCG CCGGGAAATC GACCCTCATG AAGGTGCTGT CGGGGGTCTA TCCCTACGGC ACCTTCGAAG GCGACATCCT GTGGGAAGGT GAACCGCTGC GCGCGCACTC GGTGCGCGAC AGCGAGCGCG CCGGCATCGT CATCATTCAC CAGGAACTGA TGCTGGTGCA GCAGCTCTCC GTCACGGAAA ACATCTTCCT CGGCAACGAG ATCACCAAGC CGGGGGGCCG CATGGACTAT GACGCCATGC ACGCCAAGGC CGAAGAACTG CTCGCCCGCC TGCGCCTGAC CGACGTGAAC GTGGCTGCGC CCGTGATGAA CTACGGCAGC GGCCACCAGC AGTTGTTCGA GATCGCCAAG GCGCTCGCCA AGAACGCGCG CCTGCTGATC CTCGACGAGC CGACCTCGTC GTTGAGCGCC AAGGAAATCG AGGTGTTGCT GTCCATCATC GAAGACCTCA AGCGCAGCGG CGTGGCCTGC GTCTATATCT CGCACAAGCT CGATGAAGTG AAGCGCGTGT GCGACACGAT CACGGTCATC CGCGACGGCA AGCACATCGG CACGCGTCCC GCCGCCGACA TGACCATCGA CAACATCATC ACCATGATGG TCGGCCGCGA GATGACATCG CTCTTTCCCA AGGTGGAGCA CACCGTGGGC GAAGTCGTGA TGGAAGCGCG CAACGTCACC TGCTGGGACG TCACCAACCC CAACCGGAAA CGCGCCGACG ACGTGAGTTT CGCCGTACGC CGCGGCGAGA TTCTCGGCAT TGCCGGGCTG GTCGGCGCCG GGCGCACGGA GATGGTGTCC GCGCTGTTCG GCGCGTATCC CGGCCGCTCG ACGGCCGAGA TCAAGGTCGA AGGCAAGCCC GTCAAGGTGA GCTCCCCCGC GCAAGCGATC GCCAACGGCA TCTGCCTGGT GCCCGAAGAC CGCAAGCGCC ACGGCATCGT GCCGCTGATG GGCGTGGGCG AGAACATCAC GCTCGCCACG CTGGCGCAGT ACGCGCGCGG CATGCGCGTC GACAAGGGCG CCGAACTCAC CACCGTCGAC CGCGAGATCA AGCGCCTGCG CATCAAGACC GCCAGCCCGG CGCTGTCGAT CGCCAGCCTC TCGGGCGGCA ACCAGCAGAA GGCCGTCGTC ACGAAGATGG TGCTGGCGAT GCCGAAGGTG CTGATCCTCG ACGAACCCAC GCGTGGCGTG GACGTGGGCT CGAAGTACGA CATCTACAAG ATGATTGCCG ATCTGGCCGC CAGCGGTGTG GCAATCATCA TGGTCTCTTC CGAGATGCCG GAAATCCTGG GCATGAGCGA TCGTGTCCTG GTCATGGGCG AGGGCCAGTT ACGTGGCGAC TTCGTCAACC AAGGCCTGAC CCAGGAGCGC ATCCTGGCTG CAGCAATCAA TGCCGATCCG CAGCTCCGCG CTGCCTGA
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Protein sequence | MSSNGTLFEM RNIVKSFSGV RALDGVSLAV KPGECVGLCG ENGAGKSTLM KVLSGVYPYG TFEGDILWEG EPLRAHSVRD SERAGIVIIH QELMLVQQLS VTENIFLGNE ITKPGGRMDY DAMHAKAEEL LARLRLTDVN VAAPVMNYGS GHQQLFEIAK ALAKNARLLI LDEPTSSLSA KEIEVLLSII EDLKRSGVAC VYISHKLDEV KRVCDTITVI RDGKHIGTRP AADMTIDNII TMMVGREMTS LFPKVEHTVG EVVMEARNVT CWDVTNPNRK RADDVSFAVR RGEILGIAGL VGAGRTEMVS ALFGAYPGRS TAEIKVEGKP VKVSSPAQAI ANGICLVPED RKRHGIVPLM GVGENITLAT LAQYARGMRV DKGAELTTVD REIKRLRIKT ASPALSIASL SGGNQQKAVV TKMVLAMPKV LILDEPTRGV DVGSKYDIYK MIADLAASGV AIIMVSSEMP EILGMSDRVL VMGEGQLRGD FVNQGLTQER ILAAAINADP QLRAA
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