| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3836 |
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| Symbol | |
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| ID | 8021523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 406016 |
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| End bp | 407023 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644832626 |
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| Product | D-xylose ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_002983767 |
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| Protein GI | 241665408 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.607275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTCCC GCGTACTGAA CACCCTGGCC GCCGCGGCGG TCCTGACCTT CGCCGCCACG
TCGGCCCATG CCAGCAAGCA GGCACCGGTC ATCGGCTTCT CGATCGACGA CCTGCGTGTC
GAGCGCTGGA CGCACGACCG CGATTACTTT GTTGAATCGG CGAAGAAGCT GGGCGCGACC
GTCAACGTGC AGTCGGCCAA CGCCAACGAA GCCAAGCAGA TCGCCCAGAT CGAAAACCTG
ATCGCGCAGA ACGTCGACGT GCTCGTGATC GTGCCGTTCA ATTCGAAGGT GCTGGGTAAC
GCCATTGCCA GCGCCAAGAA GAAGGGCATC AAGGTGGTGT CGTACGACCG CCTGATCCTG
AACGCCGACA TCGACGGTTA TGTCTCGTTC GACAACGAGA AGGTCGGTGA AATGCAAGCC
CAGGGCGTGG TCAAGCTGGC GCCCAAGGGC AATTATTTCC TGCTGGGTGG CGCGTCGACC
GACAACAATG CCCGCATCCT GCGCGACGGC CAGATGAAGG TGCTCAAGCC GCTGGTCGAC
AAGGGCGACA TCAAGATCGT CGGGCAGCAA TGGACGCCGG AGTGGGATCC GTCCAAGGCG
CAGAGCATTG TTGAAAACGC GCTGACCGCG AACAACAACA ACATCCAGGG CATCGTCGCC
TCCAACGACG GCACGGCGGG CGGCGCGATC CAGGCGCTTG CGGGCCAGAA GCTGGCGGGC
AAGGTGCCGG TCTCGGGTCA GGACGCCGAC CTGGCCGGTG TGCGCCGCGT GGCGGAAGGC
ACGCAGGCCA TGACGGTATA CAAGCCGATC AAGGTGATCG CCTCGACCGC AGCCGAAATG
GCCGTGGATC TGGTCAAGGG CACGCAGCCG AAGTTCAACA CCAAGATCAA CAATGGCAAG
AAGGATGTCG ACACCATCCT GCTGACGCCG ACGCTGCTGA CGAAGGACAA CCTGGATACC
GTCATCAAGG ACGGCTTCTA CACGCATCAG CAGATTTTCG GCAAGTAA
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| Protein sequence | MISRVLNTLA AAAVLTFAAT SAHASKQAPV IGFSIDDLRV ERWTHDRDYF VESAKKLGAT
VNVQSANANE AKQIAQIENL IAQNVDVLVI VPFNSKVLGN AIASAKKKGI KVVSYDRLIL
NADIDGYVSF DNEKVGEMQA QGVVKLAPKG NYFLLGGAST DNNARILRDG QMKVLKPLVD
KGDIKIVGQQ WTPEWDPSKA QSIVENALTA NNNNIQGIVA SNDGTAGGAI QALAGQKLAG
KVPVSGQDAD LAGVRRVAEG TQAMTVYKPI KVIASTAAEM AVDLVKGTQP KFNTKINNGK
KDVDTILLTP TLLTKDNLDT VIKDGFYTHQ QIFGK
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