Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3828 |
Symbol | |
ID | 8021515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 398817 |
End bp | 399587 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832618 |
Product | ABC transporter related |
Protein accession | YP_002983759 |
Protein GI | 241665400 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA CGCCCATCCT CCAAGCCACC GGCATCGTCA AGCAGTACGG CAAGTTCACT GCACTGGGCG GCGTCGATTT GCGTGTGATG CACGGCACGG TCCACTCCGT CATCGGCCCC AACGGCGCGG GCAAGACCAC GCTGTTCCAC ATGCTCACGG GCACGCGCAT GATCACCAGC GGCACCATCG TCTTCGATGG CCACGACGTG ACGCGCGAGG CCGACTTCCA GCGCGTGCAG CGCGGCATCG CGCGTTCGTT CCAGGTGACG AGCCTGTTCC CGAGCCTGTC CGTGCGCGAG AACCTGCGCC TCGCTGCCCT CGGCACCACG CCGCGCCGTG CCATGCACGG CTGGCGCCTG CCGCAGGGCG ATCTTGCCTG CAGCGATACG GTCGACCGCG TGCTCGATCG CCTTGAATTG CCGCGCCTGG CCGACACGCC GGCCGCCGCG CTCTCGCATG GTCAGCAGCG TCGGCTGGAA GTCGGCATGG CGCTGGCCGC CAATCCGCGC GCGATCTTCC TCGACGAACC GACTTCCGGC ATGGGCGTGG ACGACCTGCC CGCCATGAAG ACGCTCATTC GCGGCCTGGC GCAGGACCAC ACCGTCGTGC TGATCGAACA CAACATGGAC ATCGTGATGG ACATCTCCGA CACCATCACC GTCATGCAGC AGGGCAAGGT GCTCATGGAG GGCACGCCCG ACGCCGTACG AGCGGACCCA CGCGTGCGCG CCGCGTATCT CGGCAACATG ATCACGGGAG GCAAGAAATG A
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Protein sequence | MTTTPILQAT GIVKQYGKFT ALGGVDLRVM HGTVHSVIGP NGAGKTTLFH MLTGTRMITS GTIVFDGHDV TREADFQRVQ RGIARSFQVT SLFPSLSVRE NLRLAALGTT PRRAMHGWRL PQGDLACSDT VDRVLDRLEL PRLADTPAAA LSHGQQRRLE VGMALAANPR AIFLDEPTSG MGVDDLPAMK TLIRGLAQDH TVVLIEHNMD IVMDISDTIT VMQQGKVLME GTPDAVRADP RVRAAYLGNM ITGGKK
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