Gene Rpic12D_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3823 
Symbol 
ID8021510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp393727 
End bp394083 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content65% 
IMG OID644832613 
ProductEndoribonuclease L-PSP 
Protein accessionYP_002983754 
Protein GI241665395 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCCAACGCTT CCACACCAAC GCCCGCATGA GTCAGATCGT GATCGCCAAC 
GGCATCGTGC ACCTGGCCGG GCAAGTGCCC GAGATCGACT TCAAGTCGGT CACCGAGCAG
ACCAACAACA TCCTCGAGCG CATCGACGCC CTGCTGGCCG AAGCCGGTGT GGACAAGACG
CGATTGATTT CCGCCAACAT CTGGCTGACC GACGCCAAGC ACTTTGCGGA GCTGAACGCC
GCGTGGGAAG CCTGGGTGCC GGCCGGCCAC GCGCCCACGC GCGCCTGCGT GCAGTCGGGC
CTGATGCGCC CGGGCATCGA TGTGGAAATC GCCGTCACGG CGCTGGCCAA GGGTTAA
 
Protein sequence
MTDIQRFHTN ARMSQIVIAN GIVHLAGQVP EIDFKSVTEQ TNNILERIDA LLAEAGVDKT 
RLISANIWLT DAKHFAELNA AWEAWVPAGH APTRACVQSG LMRPGIDVEI AVTALAKG