| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3820 |
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| Symbol | |
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| ID | 8021507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 389578 |
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| End bp | 390891 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644832610 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002983751 |
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| Protein GI | 241665392 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGC AAACATCCGG TGCCCATTCC GGGGCGCACT CTGGACACTT GGCGGACGGC
CCGCCCCACC ACGTTGTCAC GGTGGACCCG ATCGAACAGG TGGACCGCGG CCCTGCCATG
CGCCGCGCAC GCTGGGTCGT GATGGTCGTG GGGGTGCTCC TTGCGCTGGG CGCTGCGCGC
ACGCTGGTCG GCCGCTACGA CAACGCGCAC GCACTGGAGC GCCAGGTGAA CGCGCAGACC
AGCCGCTACG TCACCACCAT CGCCCCCAAA CCGGCTCACA CCACTCGCGA ACTGACGCTG
CCCGGCACGC TGCAGGGCTA TGTTGAATCG CCCATCTATG CGCGCACCAG CGGTTACGTG
CTGCGCTGGT TCAAGGACAT CGGCGCCCAC GTCGACAAGG GCGAAGTGCT GGCGCTGCTC
GACACGCCGG AAGTCGACCA GGAACTGAAC CAGGCACAGG CCACGCGCAA CCAGGCCGCC
GCACGCAAGG CGCTGGCGCA GACCTCGCTC ACGCGCTGGC AGAACCTGCG TCAGAAAGAC
GCCGTCTCGC AACAGGAGCT GGACGAGCGC ACCAGCGCCG CCAACCAGGC CCAGGCCGAC
CTGGCCGCTG CGGAAGCCAA CGTGCGCCGC CTGCAGGAGC TGCAAGGCTT TCGCCGGGTG
GTGGCGCCGT TTGCGGGCGT GGTGACCAAG CGCAATGTCG ATGTCGGCGC GTTGGTCAAT
GCCGGCAACG CGGGGGCCAA CCGCGAGCTG TTCACGCTGG CGCAGACCGA TCCGCTGCGC
ATCTACCTGT ATGTGCCGCA GGCCTATTCG CAGCAGGTGA AGGTCGGGCA GGATGTGGCC
GTGACGCTGG CCGAACTGCC GGGCCAGACC TTCCACGGCA CCATCGCGCG GGCCTCCGGC
GCCATCGATG CCACCACGCG CACCCTGCAA GTGGAAGTAC AGTTGCCCAA CAAGGACGGC
CGCCTGCTGC CCGGCGCCTA TGTGCAGGTC GCCATCCAGG GCACAGCCGG CGGCGACGCA
GCCGGCGCCA GCGCAAAGGC AGATGCACCG GTCGCATTCA CGGTGCCGAC CAACACGCTG
CTCTTCCGCA AGGAAGGCCC GCGCATCGCC GTGGCAGAAA ACGGCCACGT CGACCTGCGC
CCCGTCACCA TCGGACGCGA CTACGGCCGC ACGGTGGAAA TCATCTCCGG CCTGAAGGCG
ACGGATGCGC TGATCCTCAA CCCGGCCGAT TCCATCGAGC AGGGCGAAGC GGTGACCATC
GTCACGCCGG CCCCGGCATC GGCGCCCGCG GCCTCCGCGC CGCACGCATC ATGA
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| Protein sequence | MSEQTSGAHS GAHSGHLADG PPHHVVTVDP IEQVDRGPAM RRARWVVMVV GVLLALGAAR
TLVGRYDNAH ALERQVNAQT SRYVTTIAPK PAHTTRELTL PGTLQGYVES PIYARTSGYV
LRWFKDIGAH VDKGEVLALL DTPEVDQELN QAQATRNQAA ARKALAQTSL TRWQNLRQKD
AVSQQELDER TSAANQAQAD LAAAEANVRR LQELQGFRRV VAPFAGVVTK RNVDVGALVN
AGNAGANREL FTLAQTDPLR IYLYVPQAYS QQVKVGQDVA VTLAELPGQT FHGTIARASG
AIDATTRTLQ VEVQLPNKDG RLLPGAYVQV AIQGTAGGDA AGASAKADAP VAFTVPTNTL
LFRKEGPRIA VAENGHVDLR PVTIGRDYGR TVEIISGLKA TDALILNPAD SIEQGEAVTI
VTPAPASAPA ASAPHAS
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