Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3818 |
Symbol | |
ID | 8021505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 385197 |
End bp | 386057 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832608 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002983749 |
Protein GI | 241665390 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGACA CGCCAGCACA GCAACCGCCC CAACACCAGG ACCGCCAGCC CGGCACCCAG GAAGACATGA CGCCGCGCCC GCGCGCAGAC ATGGAGGACT ACGTGGGCAG CGGCAAACTC AAGGACAAGG TCGCCATCGT CACCGGCGGC GACAGCGGTA TCGGCCGTGC GGTTGCCATC GGCTTCGCCA AGGAAGGCGC CGACGTGCTG ATCGCCTACC TGGACGAACA CGACGACGCC AACCAGACCT GCCGCCTTGT ACGCGCCACC GGCCGCCGCT GCGAAGCCAT TGCCGGCGAC CTGGGCGACG AAGCGCATGC CCGCGCGGTG GTCACGCAGG CGGTGGCCAT GTTCGGCAAG ATCGACATCG TCGTGAGCAA CGCCGCCGAG CAGCACCCGC AGCAAAGCCT GGCCGACATC AATGCCGACC AGCTGGAGCG CACGTTCCGC ACCAACGTTT TCGCGATGTT CCATCTGCTG CGTGCCGCGC TGCCCCATCT GCACGAAGGC GCACGCATCA TCACCACCAC GTCGGTCACC GCATTTCGCG GCAGCGGCCA CCTGGTGGAT TACGCAGCCA CGAAGGGAGC GATCCTGGCC TTCACGCGTT CGCTCGCCCA GCAACTGGCC GAAAAGAACA TCCTGGTGAA TGCCGTGGCG CAAGGCCCGA TCTGGACGCC GTTGATTCCG TCGACCTTCG ATGCCGAGCA TGTCGTCCAA TTCGGCAGCA AGGAGCCACT GGCCCGGGCT GGCCAGCCGG ATGAAGTGGC CCCTTGCTAC ATCTTTCTCG CGTCTGCCGA TGCGAGTTAC ATGACGGGGC AGACGCTGCA TCCGAATGGG GGGGAGATCG TCAATGGGTA A
|
Protein sequence | MPDTPAQQPP QHQDRQPGTQ EDMTPRPRAD MEDYVGSGKL KDKVAIVTGG DSGIGRAVAI GFAKEGADVL IAYLDEHDDA NQTCRLVRAT GRRCEAIAGD LGDEAHARAV VTQAVAMFGK IDIVVSNAAE QHPQQSLADI NADQLERTFR TNVFAMFHLL RAALPHLHEG ARIITTTSVT AFRGSGHLVD YAATKGAILA FTRSLAQQLA EKNILVNAVA QGPIWTPLIP STFDAEHVVQ FGSKEPLARA GQPDEVAPCY IFLASADASY MTGQTLHPNG GEIVNG
|
| |