Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3809 |
Symbol | |
ID | 8021496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 377922 |
End bp | 379067 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644832599 |
Product | glycosyl transferase family 9 |
Protein accession | YP_002983740 |
Protein GI | 241665381 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.843814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCCG CTGCCGACCT CCTGCGCAAT GCGCGCCGCA TCGCCGTTTT CCGCGCCCTG CAACTTGGCG ACATGCTATG CGCGGTGCCA GCGCTCCGGG CCTTGCGCGC AGCCGCCCCG CATGCGCACA TCACGCTCAT CGGACTGCCC TGGGCACGGC AGTTCCAGCA GCGCTATGCC GAGCTGCTCG ATGATTTCGT CATCTTCCCC GGCGGGCCTG GTTTTCCGGA GGCCGGACCG GGCGACACAG CCACCACGCG CGGTTTTCTT GCCGATCTGC GCGCACGCCG CTTCGACATG GCCATCCAGC TGCACGGCAG CGGTCCGCGG TCGACCGAAG TGGTCCGGCA ATTCGGGGCG GCCCATGTCT TCGGCTTTCA GCCCGGCGGG GCAATCGGGC GGCAGACGCA CGCTGCGCTG CTGCCGTGGC CGAGCCAACT GCCCGAAGCG CAGCGCCTGT TGACCTTGCT GACACACCTG GGCGCGCCCG CGGTGCCGGC CACGCCGGAC TTCCCGCTCA TGCGCGACGA CTACGCCGAG GCGCTGGCGC TGCTGCGCCG CCATGGACTG GACCGCGACC GCCTCGTCTG CCTGCATCCC GGCGCGCGCA TGCCGACGCG GCGCTGGTGG CCGGAGCGTT TTGCCGCCGT GGCGGACACG CTCGCCGTCA GCGGCTTTCA CGTTGTCATC ACCGGCGCCC CGTCCGAGGT GGACCTCGTG GAAGACGTCC GCAGCCGCAT GCGCCAGCCG GCGGCCTCGC TCGCGGGGCA GACTTCACTC GGCGGACTGG CGGCGGTGCT GAGGCTTGCG CGGCTGCTGA TCTGCAACGA CACCGGCGTC TCGCACGTGG CCGCGGCGGT ACGCGCGCCG AGCGTGGTCG TCGCGTGCGG CAGCGACGTG GCGCGGTGGG CTCCGTCCGA CCGCAGGCTG CATCGCGTGC TGGCCAGCCA CCCGCCATGC CGCCCGTGCA TGCATTGGAG ATGCCCGACC GGCCACGAAT GCGCACGCGA CGTGACGGTG CGCGAGGTGC TCGATGCCGC CTACGGCGCG TTGTTCGACC CCGAGGTGCA GATGCGGAAC CCTCCCGCCG CGCTGCCGTC CGCCGAGCCC ACCACCGCCT CGACCACCTC CCGGGGCCCG ACATGA
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Protein sequence | MTPAADLLRN ARRIAVFRAL QLGDMLCAVP ALRALRAAAP HAHITLIGLP WARQFQQRYA ELLDDFVIFP GGPGFPEAGP GDTATTRGFL ADLRARRFDM AIQLHGSGPR STEVVRQFGA AHVFGFQPGG AIGRQTHAAL LPWPSQLPEA QRLLTLLTHL GAPAVPATPD FPLMRDDYAE ALALLRRHGL DRDRLVCLHP GARMPTRRWW PERFAAVADT LAVSGFHVVI TGAPSEVDLV EDVRSRMRQP AASLAGQTSL GGLAAVLRLA RLLICNDTGV SHVAAAVRAP SVVVACGSDV ARWAPSDRRL HRVLASHPPC RPCMHWRCPT GHECARDVTV REVLDAAYGA LFDPEVQMRN PPAALPSAEP TTASTTSRGP T
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