Gene Rpic12D_3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3809 
Symbol 
ID8021496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp377922 
End bp379067 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content72% 
IMG OID644832599 
Productglycosyl transferase family 9 
Protein accessionYP_002983740 
Protein GI241665381 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.843814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCG CTGCCGACCT CCTGCGCAAT GCGCGCCGCA TCGCCGTTTT CCGCGCCCTG 
CAACTTGGCG ACATGCTATG CGCGGTGCCA GCGCTCCGGG CCTTGCGCGC AGCCGCCCCG
CATGCGCACA TCACGCTCAT CGGACTGCCC TGGGCACGGC AGTTCCAGCA GCGCTATGCC
GAGCTGCTCG ATGATTTCGT CATCTTCCCC GGCGGGCCTG GTTTTCCGGA GGCCGGACCG
GGCGACACAG CCACCACGCG CGGTTTTCTT GCCGATCTGC GCGCACGCCG CTTCGACATG
GCCATCCAGC TGCACGGCAG CGGTCCGCGG TCGACCGAAG TGGTCCGGCA ATTCGGGGCG
GCCCATGTCT TCGGCTTTCA GCCCGGCGGG GCAATCGGGC GGCAGACGCA CGCTGCGCTG
CTGCCGTGGC CGAGCCAACT GCCCGAAGCG CAGCGCCTGT TGACCTTGCT GACACACCTG
GGCGCGCCCG CGGTGCCGGC CACGCCGGAC TTCCCGCTCA TGCGCGACGA CTACGCCGAG
GCGCTGGCGC TGCTGCGCCG CCATGGACTG GACCGCGACC GCCTCGTCTG CCTGCATCCC
GGCGCGCGCA TGCCGACGCG GCGCTGGTGG CCGGAGCGTT TTGCCGCCGT GGCGGACACG
CTCGCCGTCA GCGGCTTTCA CGTTGTCATC ACCGGCGCCC CGTCCGAGGT GGACCTCGTG
GAAGACGTCC GCAGCCGCAT GCGCCAGCCG GCGGCCTCGC TCGCGGGGCA GACTTCACTC
GGCGGACTGG CGGCGGTGCT GAGGCTTGCG CGGCTGCTGA TCTGCAACGA CACCGGCGTC
TCGCACGTGG CCGCGGCGGT ACGCGCGCCG AGCGTGGTCG TCGCGTGCGG CAGCGACGTG
GCGCGGTGGG CTCCGTCCGA CCGCAGGCTG CATCGCGTGC TGGCCAGCCA CCCGCCATGC
CGCCCGTGCA TGCATTGGAG ATGCCCGACC GGCCACGAAT GCGCACGCGA CGTGACGGTG
CGCGAGGTGC TCGATGCCGC CTACGGCGCG TTGTTCGACC CCGAGGTGCA GATGCGGAAC
CCTCCCGCCG CGCTGCCGTC CGCCGAGCCC ACCACCGCCT CGACCACCTC CCGGGGCCCG
ACATGA
 
Protein sequence
MTPAADLLRN ARRIAVFRAL QLGDMLCAVP ALRALRAAAP HAHITLIGLP WARQFQQRYA 
ELLDDFVIFP GGPGFPEAGP GDTATTRGFL ADLRARRFDM AIQLHGSGPR STEVVRQFGA
AHVFGFQPGG AIGRQTHAAL LPWPSQLPEA QRLLTLLTHL GAPAVPATPD FPLMRDDYAE
ALALLRRHGL DRDRLVCLHP GARMPTRRWW PERFAAVADT LAVSGFHVVI TGAPSEVDLV
EDVRSRMRQP AASLAGQTSL GGLAAVLRLA RLLICNDTGV SHVAAAVRAP SVVVACGSDV
ARWAPSDRRL HRVLASHPPC RPCMHWRCPT GHECARDVTV REVLDAAYGA LFDPEVQMRN
PPAALPSAEP TTASTTSRGP T