Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3806 |
Symbol | |
ID | 8021493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 373814 |
End bp | 375025 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644832596 |
Product | glycosyl transferase family 9 |
Protein accession | YP_002983737 |
Protein GI | 241665378 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGG CCGGCATTCC CGATCGCCGC GCGGTGTGGG CGAACGCATC ACGCATCCTG TGCGTGCGCC CCGACAACCT TGGCGACGTT GTGATGACCA CGCCTGCGTT CCACGCGCTC AAGGCAGCCG CACGTGCCGA TGGCGCCCGC AGGCATCTGA CGCTGCTGAC GTCGCGTGCG GGCGCCACCG CCGTGCCCCA CCTGTCGGAC ATCGATGACG TGATTGCCTG CGACGTCCCA TGGGCCAAGC ACGCGAACGC CGCCGACGCC GATCAGACCG GTGCGCTGGT CGACACGCTG GGCCAGGGCG CGTTTGACGC CGCGGTCATC TTTACCGTGC ACACACAGAA CCCACTGCCT GCGGCCATGC TGTGCTTCCT CGCGGGTATT CCGCTGCGCC TAGCGCACTG CCGGGAGAAT CCGTACGCGC TGCTGACGGA CTGGATTGCC GACGCCGATG CGCGCATCGC CGCGACTGCG CCCGGCGACG TGCGCCACGA GGTGCGTCGC CAGCTGGACC TTGTGGCGCA GGTGACGGCG GTGCCGCCGC ACCTTCCGCA CCGGCTGCGC TTCACGGTGC GACCCGCCGA CCGCGACACC GTCCGTACAA AGCTCAGCGC ACGCGGCATC CGCCATGACG CCCCGTGGAT CGTGCTGCAT CCGGGGGCGA CCGCCGCGTC GCGCCGCTAT CCACCCGACC GCTTTGCGCG CATTGCACGC GCGCTGGCCG CGCGCTACGG CTGTCCGGTG CTCGTGACTG GCGCGCCGGC AGAGGCCGAG CTGGTTCAGC AGGTGTGCAG GCCGGGGCTG GTGGCCGGGC AACCCGTGCT GGACCTGGCC GGTGCGCTGA CGCTGGGCGA GTTGGCCGCG CTCATCGAGG GCGCGGCGCT GCTGGTCTCC AACAACAGCG GCCCCGTGCA CCTGGCCGCC GCCACGCTTA CACCAGTGGT CGATCTGTAC GCACTGACCA ACCCGCAGCA CACGCCGTGG GCCGTGCCCC ATGCAGTGCT CTCACACCAG GTGCCGTGCC GCTATTGCTA CCGCAGCGTC TGTCCGCTCG GCCACCAGGC CTGTCTGACC GGCGTGGCGG AAGATGACGT CATCGCCGCC GCACAGGGGT TGTGGCAGCC GACGCGCGTG GCGCAGGCAC TGTGGCCCCA GCGCGCGTCG CCTGCCCCGT CTGCGACGGG CGCCATGACG CCCGTCGCCT GA
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Protein sequence | MSVAGIPDRR AVWANASRIL CVRPDNLGDV VMTTPAFHAL KAAARADGAR RHLTLLTSRA GATAVPHLSD IDDVIACDVP WAKHANAADA DQTGALVDTL GQGAFDAAVI FTVHTQNPLP AAMLCFLAGI PLRLAHCREN PYALLTDWIA DADARIAATA PGDVRHEVRR QLDLVAQVTA VPPHLPHRLR FTVRPADRDT VRTKLSARGI RHDAPWIVLH PGATAASRRY PPDRFARIAR ALAARYGCPV LVTGAPAEAE LVQQVCRPGL VAGQPVLDLA GALTLGELAA LIEGAALLVS NNSGPVHLAA ATLTPVVDLY ALTNPQHTPW AVPHAVLSHQ VPCRYCYRSV CPLGHQACLT GVAEDDVIAA AQGLWQPTRV AQALWPQRAS PAPSATGAMT PVA
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