Gene Rpic12D_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3803 
Symbol 
ID8021490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp371087 
End bp372400 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content71% 
IMG OID644832593 
Productglycosyl transferase group 1 
Protein accessionYP_002983734 
Protein GI241665375 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG CCATGGTCAG TGAACACGCT TCACCACTCG CCGATCTGGG TGGGGTGGAC 
TGCGGCGGAC AGAACGTCTA CGTGCGCCAC GTGGCGCGGC AGCTTGCGCG GCTGGGGCAT
CGCGTCGATG TCTTCACCCG CCGCGAAGGC CCGGGCCAGG CCGACGCCGT GACGTTCGAC
CACGGATGCC GCGTCATCCA CGTACCGGCC GGGCCCGCCG CCGTGCTGCC CAAGGAAGCG
CTGCTGCCGC ACATGCACGC TTTCGGCCGC CACCTGCTCA ATCAGTGCGC GCAGGCCCGC
GCCGCCGGTG ACGGATATGA CGTGATTCAC GCCAACTTCT TCATGTCGGG CCTGGCCTCG
CTGGGCGCGG CGGCGCGGTT GCACGTTCCG CTCGTCACGA CGTTCCACGC GCTGGGCCGG
GTCCGGCGCC TGCACCAGGG CCGCGCGGAC GGCTTCCCCG ATGCGCGCTT CGCCATTGAA
GACACGCTCG TGCAACGGTC CGATCGCATC ATCGCCGAGT GCCCGCAGGA CCAGGACGAC
CTCGAAACGC TGTACCACGC GCGCACAGAG CAGATCGACG TGGTGCCCTG CGGCTTCGAT
GCCGCCGAGT TCGCCCCCAT CGACCGAGCG CAGGCGCGGC GCCTGCTGGG TGTGCCGGCT
GACGCGTTCG TCGTGCTGCA GCTCGGCCGC ATGGTCGCGC GCAAGGGCGT CGACAACGTC
ATCGAGGCGA TCGGCAAGCT GCCGCCCGAT GTGCGCAAGC GCGTGCGCCT CTACGTGGTG
GGCGGTAACA GCGTGACGCC GGACGTGGCC GCCACGCCGG AGCTCGGCCG CCTGCAACGC
GTGGCCGCAG AGGCGGGCGT GACCGGGCTG ACGGTATTCG TTGGCAAGCG GGGCCGCACC
GACCTGCGTG CCTGGTACAG CGCCAGCGAT GTCTTCGTCA GCACCCCCTG GTACGAGCCG
TTCGGCATCA CGCCGGTTGA AGCCATGGCG TGCGGGCGCG CCGTGATCGG CGCAGATGTG
GGCGGCATCC GCTCCACCGT GCGACACGGG CGCACGGGCT TCCTCGTCCC GCCCAAAGAC
CCGCAGGCCC TGGCCGCACG CCTGCTGCAG CTCATGCAGC AGCCCGAGCT GTGCCGCGAG
CTTGGGCAGG CCGGGCTGGT GCGGGCCCGC ATGCTCTACA CCTGGCTGGG CGTCGCGGGA
CAACTCGAAC GTGCATACCT CAAGGCCATC GACACCTGCA GCCGCGCCAC GGCCCGCGTG
GACGGCACCG CGCCCAGCGC CAATGCCGAC GTGCCGGCAG GGCTCGCAGC ATGA
 
Protein sequence
MRIAMVSEHA SPLADLGGVD CGGQNVYVRH VARQLARLGH RVDVFTRREG PGQADAVTFD 
HGCRVIHVPA GPAAVLPKEA LLPHMHAFGR HLLNQCAQAR AAGDGYDVIH ANFFMSGLAS
LGAAARLHVP LVTTFHALGR VRRLHQGRAD GFPDARFAIE DTLVQRSDRI IAECPQDQDD
LETLYHARTE QIDVVPCGFD AAEFAPIDRA QARRLLGVPA DAFVVLQLGR MVARKGVDNV
IEAIGKLPPD VRKRVRLYVV GGNSVTPDVA ATPELGRLQR VAAEAGVTGL TVFVGKRGRT
DLRAWYSASD VFVSTPWYEP FGITPVEAMA CGRAVIGADV GGIRSTVRHG RTGFLVPPKD
PQALAARLLQ LMQQPELCRE LGQAGLVRAR MLYTWLGVAG QLERAYLKAI DTCSRATARV
DGTAPSANAD VPAGLAA