Gene Rpic12D_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3798 
Symbol 
ID8021485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp364812 
End bp365504 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content64% 
IMG OID644832588 
Productcytochrome c oxidase subunit III 
Protein accessionYP_002983729 
Protein GI241665370 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CCACGCTCCC TACCGGATCA GCCGAGCCGC TCCCCGGCGG CTGGCCCGGC 
ATCGTCACCG ACTGGTCAGC CAACGGCGAG GCCTTCAAGG TGCCGTGGGG CAAGGCCATG
ATGTGGATCT TCCTGCTGTC GGACACCTTC GTCTTCAGCA GCTTCCTGAT CGGCTACATG
GCGGTACGCA TGTCGACCAC CGTGCCGTGG CCCGACACCG CCGAGGTCTT CGGCATGCGG
ATCGGCGGCG TGGAGGTGCC GCTCCTGCTG ATCGCCATCA TGACCTTCGT GCTCATCAGC
AGCAGCGGCA CCATGGCGAT GGCCGTCAAC TTCGGCTACC GGCGCAATGC CCGGCGCGCC
GCTGCGCTCA TGCTCGCGAC CGCGCTACTC GGCGCAACCT TCGTCTCCCT GCAGGCGTTC
GAGTGGACCC GGCTGATCGT CAACGAGGGC GTGCGCCCGT GGGGCAACCC GCTGGGCGCC
GCACAGTTTG GCGCGTGCTT CTTCATGATC ACCGGGTTCC ACGGTTTTCA CGTGACGTGC
GGCGTGATCT ATCTGTTGCT GATCGCGCGC AAGATCCTGC AACCGGGCTT TGTTGAACGC
GGCAACTTCC AGATTGTGGA GATCGCGGGC CTTTACTGGC ACTTCGTCGA TCTTGTCTGG
GTGTTCATCT TTGCGTTGTT CTACCTGTGG TGA
 
Protein sequence
MSTPTLPTGS AEPLPGGWPG IVTDWSANGE AFKVPWGKAM MWIFLLSDTF VFSSFLIGYM 
AVRMSTTVPW PDTAEVFGMR IGGVEVPLLL IAIMTFVLIS SSGTMAMAVN FGYRRNARRA
AALMLATALL GATFVSLQAF EWTRLIVNEG VRPWGNPLGA AQFGACFFMI TGFHGFHVTC
GVIYLLLIAR KILQPGFVER GNFQIVEIAG LYWHFVDLVW VFIFALFYLW