Gene Rpic12D_3790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3790 
Symbol 
ID8021477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp355760 
End bp357229 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content66% 
IMG OID644832580 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_002983721 
Protein GI241665362 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTGC CCGCATTCGA CATGGTGTTG TTCGGCGGTA CGGGCGATCT TGCCCGCCGC 
AAGCTGATCC CGGCCTTGTT CGATGCGCAC CAGGGCGGCG AACTGCACCC GCGCGGGCGC
ATCTTTGCCA TCGGCACGCA ACCGCTGGAA ACAGCGGGCT ACCTGGCCCT GCTCGAACGC
GAGACGCGGC CGACCATGCG GCTGTACTCG GGGGCCCCCG TGTCCGACGA TGCCTGGGCC
TCGTTTGCCG ACCGTGTCGT CTATCAGCAG GTCGATGCCC GCAAACCCGA GCAGTTCGAC
GCGCTGGCCG CCGCGCTGGG TGAGGACCGC GCGCCCGTGA CCGTATGCTA TCTGGCAACG
GCGCCGGGCA TTTTCGTCGA CATCTGCGCG CAGCTTGCGC GCGTCGGGCT GAATACGCCG
AACGTGCGCC TGGTGCTGGA AAAGCCGCTC GGCACCGATC TCGCATCGAA TGAGCGTATC
AACTCCGCCG TGGCGGAGTT CTTTGCCGAA GACCAGATCT ACCGCATCGA CCACTACCTG
GGGAAGGAGT CGGTCCAGAA CCTGATGGCC ATCCGCTTCG GCAATGCGCT GTTCGAGCCG
CTGTGGCGCC GCGAGTGGAT CAAGGATGTG CAGATCACCA TCGCCGAGCA GCTTGGCGTG
GAAAAGCGCG GGGACTTTTA CGACGGCGTC GGCGCGTTGC GCGACATGGT GCAGAACCAC
CTGCTGCAAC TGCTGTGCAT CGTCGCGATG GAGCCGCCGT CGAGTCTGTC CCAAGACGCC
ATCCGCGACG AGAAGCTGAA GATCCTCAAG GCGCTTGCGC CGATCCCGCT GCAGGAGGTG
CCCGAGAAGA CCGTGCGCGG TCAGTATCTG GAGGGCGCCA TTGCCGGCCA GCCGGTGCAG
GGTTATCTGC ACGAACAGGG GATTCCGCCC GACAGCCGCA CCGAAACCTT CGTCGCGATC
AAGGCCGAGA TCGCCAACTG GCGCTGGGCC GGCGTGCCGT TCTATCTGCG TACCGGCAAG
CGCATGCCGC AGCGGCTGGC GGAAATCGTG GTGCGCTTTC ATGACGTGCC ACATGCGCTG
TTTCCCAAGC CGCTCATCCA GTTTCCAGAG AACCGGCTCG TCATCCGCCT GCAGCCGGAA
GAGAGTATCC GCCTGCAGTT CCTGACCAAG GCTCCGGGCG CGGCGCTGGG CTTGCAGCCC
TCCACGCTGG ACCTGGATTT CACCGACCAC GGCGGCGTGC GCCACGCGGG CGCCTATGAA
CGCCTGCTGA TGGATGCCGT CAACGGCAAG CTGGGCCTGT TCGTGCGCCG CGACGAGCAG
GCGGAAGCCT GGCGCTGGGT CGAGCCGATC ATCGAAGCGT GGAACGAAGC GCGTATGCCG
CCCAAGGGCT ATACCGCCGG TAGCTGGGGC CCTGCCGCGT CGAGCGCCTT GCTCTCGCGC
GATGGCGCAG CCTGGCACGA GGAGATGTAA
 
Protein sequence
MSVPAFDMVL FGGTGDLARR KLIPALFDAH QGGELHPRGR IFAIGTQPLE TAGYLALLER 
ETRPTMRLYS GAPVSDDAWA SFADRVVYQQ VDARKPEQFD ALAAALGEDR APVTVCYLAT
APGIFVDICA QLARVGLNTP NVRLVLEKPL GTDLASNERI NSAVAEFFAE DQIYRIDHYL
GKESVQNLMA IRFGNALFEP LWRREWIKDV QITIAEQLGV EKRGDFYDGV GALRDMVQNH
LLQLLCIVAM EPPSSLSQDA IRDEKLKILK ALAPIPLQEV PEKTVRGQYL EGAIAGQPVQ
GYLHEQGIPP DSRTETFVAI KAEIANWRWA GVPFYLRTGK RMPQRLAEIV VRFHDVPHAL
FPKPLIQFPE NRLVIRLQPE ESIRLQFLTK APGAALGLQP STLDLDFTDH GGVRHAGAYE
RLLMDAVNGK LGLFVRRDEQ AEAWRWVEPI IEAWNEARMP PKGYTAGSWG PAASSALLSR
DGAAWHEEM